Gene detail

Detailed information of FUN_038203-T1 in Acropora pulchra

Genomic Location: ptg000027l:3713802...3722440
NR annotation: XP_029191869.2, ribosomal L1 domain-containing protein 1-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
O76021	Ribosomal L1 domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RSL1D1 PE=1 SV=3
Q5RCE6	Ribosomal L1 domain-containing protein 1 OS=Pongo abelii OX=9601 GN=RSL1D1 PE=2 SV=2
Q9UT32	Putative ribosome biogenesis protein C8F11.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC8F11.04 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00687	Ribosomal_L1	Ribosomal protein L1p/L10e family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023674	Homologous_superfamily	Ribosomal protein uL1-like	Interproscan
IPR050257	Family	Eukaryotic ribosomal RNA-processing and assembly protein	Interproscan
IPR016095	Homologous_superfamily	Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain	Interproscan
IPR028364	Family	Ribosomal protein uL1/ribosomal biogenesis protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000470	Biological Process	maturation of LSU-rRNA	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0022625	Cellular Component	cytosolic large ribosomal subunit	Interproscan
GO:0030686	Cellular Component	90S preribosome	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14775	UTP30, RSL1D1; ribosome biogenesis protein UTP30	-	Ribosome biogenesis	ko03009	deepkoala