Gene detail

Detailed information of FUN_038233-T1 in Acropora pulchra

Genomic Location: ptg000027l:4515558...4534888
NR annotation: XP_015766504.1, PREDICTED: uncharacterized protein LOC107345312 [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_038233-T1

ATGGCTTCTCTTGCTTCGTTAGTTTACTTCGTGATAACTTTGCTTGCTCTCATAAGATCTTCGTTCGCTTGTAATGCTACTTCGGAACACTACTCTAGAGTGATTAAGGCTCTTAATGTAACTGTCAGATCCGAAGCAGCAAACGACCCTGGTAAGACTCAACCAAGCGGCTTAGCTTACATTGAGGTTAACGGAAAAAACTACGCACCGCAAAGCAAAGGATTCAATCTTGCTGCTTTTGATGCGCTGTCCGGTCGATTCTTTGCTTCTGCTGCGTATGATTGCTTCGCCAGCCAAACAGCATGCAACAATATCGGCACATTCATAGACAAGCTTCCACAAGACTCCATTGTATTGATCGCAATACAACAGTCTGGGGCAACAAACAGTCACAGGCCTCCATCAATCAAACTTCAGAAACTGGGAGCTCAAAATATCACCTCTGTTGCTGAAAATACTTCCTACGTTTTGATTGGTTACAAGGGAAGCAAAAGTGTAGACTGGAAGCAACATTTGTTCAAAAGTAACGCAGCCGGCCCAGCCGAAGTCTCAGGCCTTATTCCAATCCAATGCTCCGACTTACCATCGGTGTCTACGACTTGCAGTCCATTCAACGTGGCATCTCAGAAATATGGAGGCACATGTTTGGACGAATCTTCAAGCAATGGCTTATCAAATGCATGCATAAACACAATTAACGGGAATGCTTCCACCGCCTGGGAATCAACGTCTAACGGAGCTGTTGACTCTTTCATAAAAATTGGATTCCACACTGTCTTTACTATCAACAAGCTACGAATTCGACCAAATCTGGTGTCAGGGCGACAAATCAAAGAGATTCTGATGGAGTTCAGTGACTGCTCATATGAAAAGATCTCATTGGCGGGAGATATCGCAGATTTCCAGGAGTTTACCTTCATCTCTCGCCAAGCACGTTGGGTAAAGTTTACAGTCCAGAAGGTGTACGGATACAGCGGTGGGGTTGGCATTCAGGATATAGAGATCTACAATGAACTTTGCAATCCGAAAACGATTTGTGATGTTGTACAAATTGAAACAAACCTAACATCTTCGAGGTATCGATTACACTCAACAAAATTTCCACTTATGATTGATGCCAGTGGCGAAGTCCACGTGCTCCTCACAAGCGAATCACGTGCTTCGAGCTCACGTTATGAAGTTGTCATCGGATCAACGGCCAACAAGGACACTGCTTTAAAAAGAATTGACAATGGGATCACTGAAGAAGTGGTGAGGCGAAGCAACACTGGGCATTTGAAAGGGGGAGAGAGCAGATCATTTTGGATTGAAGTAGAAAATGGGCACCTTCTTTTTGGCTCTGGAGAACAGGATGCCGTCCACTATTGGCCGTTGGACAAGCTTGCAGTTCGAGAGTTCAAGAAGAAGAGGAGCACACTCGGGAAGATCCACGGACCGGTGACAGTTGGAAAAGCAGCTTCCACATCAATTCTGGGATTTTTTCCTTTAGCCCTCTCTCTTGACGGACAGACCTCTTGGATCCATCTCGGAGACTATCCAAATAGCTGTCTTAATGATGTGTCAAAGAGCCCGGGTGGAGTTTCTCTGAGTTTTAAAGCGATTATTACAGGATACACAAGCGGTAGCCTTCTCTCCACCGCGGCAATTAGTGTCTATCACACCAATAACAACATCCATTTTGTCCTCCGGGACAAGGAGAAACTTTGGGAAGTTAAACCTAATTGCAGGAAATTTAAGTGGCAGACATTTGGAATGAGCTGGAGCAGAGAAAATGGGCTAACCGCTGTCATTGCTGGGGATACCACTACTGTGTTACGTGACACCACTGGGAGGAATGTCGCGCCATCTAATACGTCACACACGACGGTCACGATCGGCCAGCGCGAAAACACCATGTATGCCGAGGCTAAGATAAGAGATGTTGCTGTGTGGACCGAAGAACTTGGAGAAGAGAGGCTGTCAAAACTTCATTCCTGTAATGATGCAGACGTGTGTGCGTTGAACTGGCAGTATTTTGACGGCTCCTGTTATAAAGAGACCTCTGCAAGTATCTCGGCACATGAAACGCCCAATGCCTGCCAGGTTGAAGATGCGAACTTGGTAAAGATTACTTCAAGCGAAGAAAACTCTTTTCTCAATAGTTTCAACGCAACGACAAAATACGTCTGTGAAAAAGTTCCTCACAATTATTTGGGTTGTTATCAAGAGAATTCCAGCTCCCCTGTGTTTAATTTCAACCCGGGTGGATACAGACCAAGCCGTATGACCCCAGGCCTCTGCATGCACGCTTGTGGAAATTGGTACTTCAAGTATGCCGCACTCAAACAGGGCAATTTATGCATGTGCTCAAATTCGACATCAGCCGTGACCGAGCGTTCTCAAGACAGGTGCTCTGTACCATGCTTTGGTTCCGGTGACTTAAAATGCGGTGGCTACCACAACTACCTTTCCATTTATAAGTCAGTGACGGTAGGGCCTCTGAGTCTGGCGCTGAATTCAGACTCACCCGCTCAAACTCTCTCGGTATTCAACATTACGCTGACGCCATTTTTATCGCCTGATCTCGTGGTGGAGTCCTACACGGTCAGCATCGGAGACGGGTACATTCACCATACTGTGGAACCATTTGCTTCGTTCATACTTTCACATCCTGGAATGTACTATGTCCTTGGAAAAGCAAAAATGAAACACAACAAAACTGGCCACACCTCAGAGATTGAATCCTTCAGCAACGTGACAGCGATGTCCAATATGACTGAGTTGGACGTATTTTGTCCATTTTGCGCACCCATTAACAGCAGCGTCACTTGCTCTGTGAAGTTTCGCTATGGAGCAGACGTAGATGCGCTGGTACAGTTTGACGATGGAGAAGCGCCTGTTGCTGCCTTGTTACCTGATGCGGCGCTCCTCAGATTAGGAATTTCGGTGGGAGAGTCCGCATCACCATTCACATCTGACGGTTTGTATCTATTAGCTGGGATCGACACCGACAGTGCAGGGGAAGTAGTGGCTATGGAAATGGATCTCGCGCAAGGCGGTTCTCTTGAAATTGAGGTTTATCGACCAAAGTGTATTAAGCTTGACCGTATATATTGCCAAGCGCAAAAAACGTGCGTAATTAACTCAACGATGTGTGCTAAAATGGCAAAGAGCTGCCACGGCGGAAAAATGTTCAGTTTAACTGGCGGGAGATGTACAGAGCAATACATGACTTGCTCCCACAACACCATGTTGGGCTTTGGAGATTTCGACTTTCAGAAGATTTCCAGCTACATGGTTTACACAACAAGCGGCCCGAAACGCATTTTAATTGACCACAGCAATCAACGTCTTCGTCTCAAACCTGGAGACGTGCTTGGAGTTCGTTTTCCGCACTCTGGACCGACAGCCGCGTTGAAAACCAGTTCGTCTGGATCTACTTTATTTTATTCAAGTTCAATGGTTAACGATACAAATTCTACAACTCTCAGGGGAAATCGCTTTCCAATGACAGCAGAGAGCCCAGCACAGGAGTCTTTCGTGCCGGCCATAGCGTTTTTTTATTCCGTTGATTCTGAATCGAAATTAGGGCACGTTTACCAGAACATAGGTCACGCAAACGTTTTGACATCAATCGGAAACTCATTAACAAGAGTAAACGACACCAAGTCGATTTGCCTGCAGGAGGATATCAAAGGATTGCAGTTATATTTCCCTAAGGTTTTTCCATTCGGTGAGGCAGTTAATGTGACCGGTGGCATCACTCAAGGGAGTAACGTGACATTCTACTGGGATTTTGGTGACAAAAATAACGCAACCAGCCTGATTCCATGGGTCGAGCACGTCTTTAACCATACTGTTGGGTTAAAGACGGTAAGTATTGTAGCTGGAAATGATATCCGAGTGGAAGCTGTCTGGTGCACCGTTTTGGTCCAAGAGAGGATTATGGGACTGCAGTTTAAAGACACGACACTTCTGCCCATCGAGAATGGAACCACAGCTGAAATCGCCTGGATCTTGCCTGATGGATCACACGTTGATTTCACTCTCAACATCACTTACCCTGGTGGCGTCATAGATTCAAAGAATCTGACCAAGGTTAAAGCACCGGCTGCTACCTTCTTCGGTAAGTACAATACAACCCTCACTCAACCTGGCTGGTACCGGATAGAAATCACAGCCTCCAATCGACTCAACAACGTGACTCTCAAAGGAAATCTCAGCGTGCAACGTGTGGTCCATGGCGTTTCAATGGACAGTCCAAAAATCCTGAAAACAAACCAAACATTCAACTTTACGATTCCACCGCACCAAGGGGATGAGATACGATACTTGTTGAACACCATGGACGGAAACATAATTAACACCACCGAGAGGTTGATACCTTTTAATTACACCAAGGCCGGGCGATATGATGCATACTTGATCGCTTTCAATGACATCAGTTCAGTGGCTGTAAAGTGTGGTCAGATTATCGTCCAGGATATGATAGAAGGCTTGCAGTTTGTAAGTTTCATTCACACTGTCGCAGTGAACGCCCAGGCGGAAATCAATTGGATTCTAACTCAAGGCTCTGAACTTGACATACGTGTCAACTACGGTGATGGAAGCTTCACATTTGTCAACCGGAGCGTTTCAGTGAGTGACGTTTTCGTGGCAATAAGCAAGCACAACTATAGCAAGCCCGGCGAATACCTTGTCATCATTAACGTGACCAACCTGGTGGACAGCAAAGAAATCAACACCACTGTCTACGTAGAAACACCGGGTAATGGCGGGGTCCTTGCCATAGGGCGCTATAATTTGAACAGAGCGGGTACCAAATCCTGCGACGGATTAAAACTTTACATAAGGGTGAACGATTCGGTTACGGCAACAGCGAAGGTCAAAAACGGGACAAACATTTACGGCTATCTGGACTTTGGGGATAATTCAAGCGTCCGCGTGCGCTATTTCCATCGGGAATTCCCAAAAGACGGATGGACAGAGCGCAATATCTACTCAGTAGCAGGAGAGTACTACATTACAACTACTTTCTCCAACAGAAACCCGGGAGATGTGAACCAAAACTGTACGGTCATTGTTCAGAATCCTGTCAATGTTGTCATGGTAACATCTGATTCGCCCAAGAAAACTAAAGAACGCGACGTCAATTTCATGGTTTCGTTTCCAGGCAGCTGGCAGCCGTCTGGCCCTCTTCGCTACCAGTGGCGCTATGGAGATGGCAAAAGCCACGAATCGGATAACAGAACGAAAATTCATCTTTATCCCAATAGATGCGGTGTTTACATCGCAACGGTGAATGTGTCAAATGAAATAAGCTTCGGCCTCGGGCAGACGGAAGTTGTAGTCCAAGATGAAGTCAAAGACCTCAAATGGTTTGCAAATTATACAAAACTTAACGTGGATTATAGAGGTAAATGTAGCGATTTCGTCCTTCCAAACAACACTTTCCCTTTCGACCACGAGGTGGCTTTTAGCGCGTACGCCAATGGCACAAACGTGTCTTACACCTGGAGTTTTCCCAGTGGCGTCAACAAGACCAATTCAAGCTGCAAGCATAAATTCAAGGTCGAAGGAAAAAATCCGATTGTGTTGACGGCGGAAAATGCCGTTAGCTTTGAAAGAATTAACATATTGCTTGAAGTGAAAAAAGAAACAAAGTGTGGTCAGATTATCGTCCAGGATGTGATAGAAGGCTTGCAGTTTGTCTATCCAAAAATCCTGAAAACAAACCAAACATTCAACTTTACGATTCCACCGCACCAAGGGGATGAGATACGATACTTGTTGAACACCATGGACGGAAACATAATTAACACCACCGAGAGGTTGATACCTTTTAATTACACCAAGGCCGGGCGATATGATGCATACTTGATCGCTTCCAATGACATCAGTTCAGTGGCTGTAAAGTGTGGTCAGATTATCGTCCAAGATGAAGTCAAAGACCTCAAATGGTTTGCAAATTATACAAAACTTAACGTGGATTATAGCGATAAATGCAGGGATTTCGTCCTTCCAAACAACACTTTCCCTTTCGATCACGAGGTGGCTTTTAGCGCACACGCCGATGGCACAAACGTGTCTTACACCTGGAGTTTTCCCAGTGGCGTCAACAAGACCAATTCAAGCTGCACGCATAAATTCGCGAAGGACGGAACCAATAGGATTGTGTTGACGGCAGAAAATACCGTAAGCTCTGAAACAAAGATCATATCGCTTGAACTGGAAAAAGAAATTCAGAATGTTTCATTTGTAAATGACGGACCATCTACGCAAAACAGCCTAGTGCATATAACCCTGAACATGACTCAATATGGCCAAGATTCCTGTTTTCTTATAGACTTCAAGGAAACAAATTTAGGGACGACGAAGCTCAAGTCATCACAGTTGGTCGACGAGTGCGATGGCGCCGAGGAAGTAGGCAAGACCCAAACCTTCCCTGTCACGTACGAGAGTGTAGGCGAGTACCCAGTTTCCTTGTATGCAAGAAACCGCGTCTCCTGTGTTTATCAAGTCTCGAAAGTGGCCGTCGTCCAGGATGTGATAGAAGGCTTGCAGTTTGTAAGTTTCAATCACACCGTCGCAGTGAATGCCCAGGCGGAAACCAGTTCGATTCTAACTCAAGGCTCTGAACTTGACATACGTGTCAGCTACGGTGATGGAAGCTCCACATTTGTCAACCGGAGCGTTTCAGTTTATTTATTATTTATTTATTTATATTTATTTCAAGATTTTTTCATATAG

Transcript

FUN_038233-T1

Protein

FUN_038233-T1

MASLASLVYFVITLLALIRSSFACNATSEHYSRVIKALNVTVRSEAANDPGKTQPSGLAYIEVNGKNYAPQSKGFNLAAFDALSGRFFASAAYDCFASQTACNNIGTFIDKLPQDSIVLIAIQQSGATNSHRPPSIKLQKLGAQNITSVAENTSYVLIGYKGSKSVDWKQHLFKSNAAGPAEVSGLIPIQCSDLPSVSTTCSPFNVASQKYGGTCLDESSSNGLSNACINTINGNASTAWESTSNGAVDSFIKIGFHTVFTINKLRIRPNLVSGRQIKEILMEFSDCSYEKISLAGDIADFQEFTFISRQARWVKFTVQKVYGYSGGVGIQDIEIYNELCNPKTICDVVQIETNLTSSRYRLHSTKFPLMIDASGEVHVLLTSESRASSSRYEVVIGSTANKDTALKRIDNGITEEVVRRSNTGHLKGGESRSFWIEVENGHLLFGSGEQDAVHYWPLDKLAVREFKKKRSTLGKIHGPVTVGKAASTSILGFFPLALSLDGQTSWIHLGDYPNSCLNDVSKSPGGVSLSFKAIITGYTSGSLLSTAAISVYHTNNNIHFVLRDKEKLWEVKPNCRKFKWQTFGMSWSRENGLTAVIAGDTTTVLRDTTGRNVAPSNTSHTTVTIGQRENTMYAEAKIRDVAVWTEELGEERLSKLHSCNDADVCALNWQYFDGSCYKETSASISAHETPNACQVEDANLVKITSSEENSFLNSFNATTKYVCEKVPHNYLGCYQENSSSPVFNFNPGGYRPSRMTPGLCMHACGNWYFKYAALKQGNLCMCSNSTSAVTERSQDRCSVPCFGSGDLKCGGYHNYLSIYKSVTVGPLSLALNSDSPAQTLSVFNITLTPFLSPDLVVESYTVSIGDGYIHHTVEPFASFILSHPGMYYVLGKAKMKHNKTGHTSEIESFSNVTAMSNMTELDVFCPFCAPINSSVTCSVKFRYGADVDALVQFDDGEAPVAALLPDAALLRLGISVGESASPFTSDGLYLLAGIDTDSAGEVVAMEMDLAQGGSLEIEVYRPKCIKLDRIYCQAQKTCVINSTMCAKMAKSCHGGKMFSLTGGRCTEQYMTCSHNTMLGFGDFDFQKISSYMVYTTSGPKRILIDHSNQRLRLKPGDVLGVRFPHSGPTAALKTSSSGSTLFYSSSMVNDTNSTTLRGNRFPMTAESPAQESFVPAIAFFYSVDSESKLGHVYQNIGHANVLTSIGNSLTRVNDTKSICLQEDIKGLQLYFPKVFPFGEAVNVTGGITQGSNVTFYWDFGDKNNATSLIPWVEHVFNHTVGLKTVSIVAGNDIRVEAVWCTVLVQERIMGLQFKDTTLLPIENGTTAEIAWILPDGSHVDFTLNITYPGGVIDSKNLTKVKAPAATFFGKYNTTLTQPGWYRIEITASNRLNNVTLKGNLSVQRVVHGVSMDSPKILKTNQTFNFTIPPHQGDEIRYLLNTMDGNIINTTERLIPFNYTKAGRYDAYLIAFNDISSVAVKCGQIIVQDMIEGLQFVSFIHTVAVNAQAEINWILTQGSELDIRVNYGDGSFTFVNRSVSVSDVFVAISKHNYSKPGEYLVIINVTNLVDSKEINTTVYVETPGNGGVLAIGRYNLNRAGTKSCDGLKLYIRVNDSVTATAKVKNGTNIYGYLDFGDNSSVRVRYFHREFPKDGWTERNIYSVAGEYYITTTFSNRNPGDVNQNCTVIVQNPVNVVMVTSDSPKKTKERDVNFMVSFPGSWQPSGPLRYQWRYGDGKSHESDNRTKIHLYPNRCGVYIATVNVSNEISFGLGQTEVVVQDEVKDLKWFANYTKLNVDYRGKCSDFVLPNNTFPFDHEVAFSAYANGTNVSYTWSFPSGVNKTNSSCKHKFKVEGKNPIVLTAENAVSFERINILLEVKKETKCGQIIVQDVIEGLQFVYPKILKTNQTFNFTIPPHQGDEIRYLLNTMDGNIINTTERLIPFNYTKAGRYDAYLIASNDISSVAVKCGQIIVQDEVKDLKWFANYTKLNVDYSDKCRDFVLPNNTFPFDHEVAFSAHADGTNVSYTWSFPSGVNKTNSSCTHKFAKDGTNRIVLTAENTVSSETKIISLELEKEIQNVSFVNDGPSTQNSLVHITLNMTQYGQDSCFLIDFKETNLGTTKLKSSQLVDECDGAEEVGKTQTFPVTYESVGEYPVSLYARNRVSCVYQVSKVAVVQDVIEGLQFVSFNHTVAVNAQAETSSILTQGSELDIRVSYGDGSSTFVNRSVSVYLLFIYLYLFQDFFI

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B8UU59	Polycystin-1-related protein (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000040 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15711 all species →	ILEI	Interleukin-like EMT inducer	Domain	Interproscan
PF12248 all species →	Methyltransf_FA	Farnesoic acid 0-methyl transferase	Family	Interproscan
PF01822 all species →	WSC	WSC domain	Domain	Interproscan
PF00801 all species →	PKD	PKD domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035986 all species →	Homologous_superfamily	PKD domain superfamily	Interproscan
IPR002889 all species →	Domain	Carbohydrate-binding WSC	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR039477 all species →	Domain	ILEI/PANDER domain	Interproscan
IPR022041 all species →	Domain	Farnesoic acid O-methyl transferase	Interproscan
IPR016187 all species →	Homologous_superfamily	C-type lectin fold	Interproscan
IPR013320 all species →	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR000601 all species →	Domain	PKD domain	Interproscan
IPR022409 all species →	Domain	PKD/Chitinase domain	Interproscan
IPR016186 all species →	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46730 all species →	POLYCYSTIN-1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005261 all species →	Molecular Function	monoatomic cation channel activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0006816 all species →	Biological Process	calcium ion transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_038233-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.