Gene detail

Detailed information of FUN_038290-T1 in Acropora pulchra

Genomic Location: ptg000027l:5328040...5335234
NR annotation: XP_029189736.1, cytosolic Fe-S cluster assembly factor NUBP2 homolog [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A7SE07	Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Nematostella vectensis OX=45351 GN=v1g229988 PE=3 SV=1
B3RPX4	Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Trichoplax adhaerens OX=10228 GN=TRIADDRAFT_53697 PE=3 SV=1
Q6DEE4	Cytosolic Fe-S cluster assembly factor nubp2 OS=Xenopus laevis OX=8355 GN=nubp2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001354 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10609 all species →	ParA	NUBPL iron-transfer P-loop NTPase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR033756 all species →	Family	Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35	Interproscan
IPR028600 all species →	Family	Cytosolic Fe-S cluster assembly factor NUBP2/Cfd1, eukaryotes	Interproscan
IPR000808 all species →	Conserved_site	Iron-sulfur cluster carrier protein-like, conserved site	Interproscan
IPR019591 all species →	Family	Mrp/NBP35 ATP-binding protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23264 all species →	NUCLEOTIDE-BINDING PROTEIN NBP35 YEAST -RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016226 all species →	Biological Process	iron-sulfur cluster assembly	Interproscan
GO:0051539 all species →	Molecular Function	4 iron, 4 sulfur cluster binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0051536 all species →	Molecular Function	iron-sulfur cluster binding	Interproscan
GO:0140663 all species →	Molecular Function	ATP-dependent FeS chaperone activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03593	mrp, NUBPL; ATP-binding protein involved in chromosome partitioning	-	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.