Detailed information of FUN_038315-T2 in Acropora pulchra

Genomic Location: ptg000027l:5625920...5646032
NR annotation: XP_015752860.1, PREDICTED: daf-12-interacting protein 1-like [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q47XI7Chaperone protein DnaJ OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) OX=167879 GN=dnaJ PE=3 SV=1
Q7N8Y3Chaperone protein DnaJ OS=Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01) OX=243265 GN=dnaJ PE=3 SV=1
Q15UD2Chaperone protein DnaJ OS=Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) OX=3042615 GN=dnaJ PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008140 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00226
all species →		DnaJDnaJ domainDomainInterproscan
PF00627
all species →		UBAUBA/TS-N domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR052068
all species →		FamilyGW182 domain-containing proteinInterproscan
IPR036869
all species →		Homologous_superfamilyChaperone J-domain superfamilyInterproscan
IPR001623
all species →		DomainDnaJ domainInterproscan
IPR009060
all species →		Homologous_superfamilyUBA-like superfamilyInterproscan
IPR015940
all species →		DomainUbiquitin-associated domainInterproscan
IPR041917
all species →		DomainTrinucleotide repeat-containing gene 6C protein, UBA domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13020
all species →		TRINUCLEOTIDE REPEAT-CONTAINING GENE 6Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000932
all species →		Cellular ComponentP-bodyInterproscan
GO:0005654
all species →		Cellular ComponentnucleoplasmInterproscan
GO:0035195
all species →		Biological ProcessmiRNA-mediated post-transcriptional gene silencingInterproscan
GO:0060213
all species →		Biological Processpositive regulation of nuclear-transcribed mRNA poly(A) tail shorteningInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_038315-T2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP