Detailed information of FUN_038371-T1 in Acropora pulchra

Genomic Location: ptg000027l:6316418...6322514
NR annotation: XP_044184686.1, U3 small nucleolar RNA-associated protein 6 homolog [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006535 (this species only)

 Pfam domain
No Pfam domain signature was detected for FUN_038371-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR013949
all species →		FamilyU3 small nucleolar RNA-associated protein 6Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23271
all species →		HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 66Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0000462
all species →		Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0030515
all species →		Molecular FunctionsnoRNA bindingInterproscan
GO:0032040
all species →		Cellular Componentsmall-subunit processomeInterproscan
GO:0034388
all species →		Cellular ComponentPwp2p-containing subcomplex of 90S preribosomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_038371-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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