Detailed information of FUN_038427-T1 in Acropora pulchra

Genomic Location: ptg000027l:7090330...7094859
NR annotation: XP_029193338.2, F-box/WD repeat-containing protein 7-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7TSL3F-box only protein 11 OS=Rattus norvegicus OX=10116 GN=Fbxo11 PE=2 SV=1
Q86XK2F-box only protein 11 OS=Homo sapiens OX=9606 GN=FBXO11 PE=1 SV=3
Q7TPD1F-box only protein 11 OS=Mus musculus OX=10090 GN=Fbxo11 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009775 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12937
all species →
F-box-likeF-box-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001810
all species →
DomainF-box domainInterproscan
IPR015943
all species →
Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR042627
all species →
FamilyF-box/WD repeat-containing protein 2Interproscan
IPR036322
all species →
Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR036047
all species →
Homologous_superfamilyF-box-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44436
all species →
F-BOX/WD REPEAT-CONTAINING PROTEIN 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_038427-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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