Detailed information of FUN_038644-T1 in Acropora pulchra

Genomic Location: ptg000027l:9730753...9735519
NR annotation: XP_029183845.2, target of rapamycin complex subunit lst8-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9DCJ1Target of rapamycin complex subunit LST8 OS=Mus musculus OX=10090 GN=Mlst8 PE=1 SV=1
Q6PA72Target of rapamycin complex subunit lst8 OS=Xenopus laevis OX=8355 GN=mlst8 PE=2 SV=1
Q17QU5Target of rapamycin complex subunit LST8 OS=Bos taurus OX=9913 GN=MLST8 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006252 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species

 Pfam domain
No Pfam domain signature was detected for FUN_038644-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR015943
all species →
Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR037588
all species →
FamilyTarget of rapamycin complex subunit LST8Interproscan
IPR036322
all species →
Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19842
all species →
G BETA-LIKE PROTEIN GBLInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0031929
all species →
Biological ProcessTOR signalingInterproscan
GO:0031931
all species →
Cellular ComponentTORC1 complexInterproscan
GO:0031932
all species →
Cellular ComponentTORC2 complexInterproscan
GO:0032956
all species →
Biological Processregulation of actin cytoskeleton organizationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_038644-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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