Detailed information of FUN_038645-T2 in Acropora pulchra

Genomic Location: ptg000027l:9735780...9767061
NR annotation: XP_044184806.1, LOW QUALITY PROTEIN: caskin-2-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8WXD9Caskin-1 OS=Homo sapiens OX=9606 GN=CASKIN1 PE=1 SV=1
Q6P9K8Caskin-1 OS=Mus musculus OX=10090 GN=Caskin1 PE=1 SV=2
Q8VHK2Caskin-1 OS=Rattus norvegicus OX=10116 GN=Caskin1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00536SAM_1SAM domain (Sterile alpha motif)DomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF13637Ank_4Ankyrin repeats (many copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001660DomainSterile alpha motif domainInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR001452DomainSH3 domainInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR033635FamilyAnkyrin repeat and SAM domain-containing protein 1/CaskinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24174ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

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