Gene detail

Detailed information of FUN_039095-T1 in Siderastrea siderea

Genomic Location: contig_47:1098071...1101626
NR annotation: no NCBI-NR hit recorded
Species Siderastrea siderea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02130 all species →	YbeY	Endoribonuclease YbeY	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002036 all species →	Family	Endoribonuclease YbeY	Interproscan
IPR023091 all species →	Homologous_superfamily	Metalloprotease catalytic domain superfamily, predicted	Interproscan
IPR020549 all species →	Conserved_site	Endoribonuclease YbeY, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46986 all species →	ENDORIBONUCLEASE YBEY, CHLOROPLASTIC	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004222 all species →	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0006364 all species →	Biological Process	rRNA processing	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_039095-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.