Detailed information of FUN_039247-T1 in Dendrogyra cylindrus

Genomic Location: contig_224:106002...116305
NR annotation: XP_020611734.1, integrator complex subunit 6-A-like [Orbicella faveolata]
Species Dendrogyra cylindrus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9UL03Integrator complex subunit 6 OS=Homo sapiens OX=9606 GN=INTS6 PE=1 SV=1
Q6PCM2Integrator complex subunit 6 OS=Mus musculus OX=10090 GN=Ints6 PE=1 SV=1
Q7SYD9Integrator complex subunit 6 OS=Danio rerio OX=7955 GN=ints6l PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005536 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15300
all species →		INT_SG_DDX_CT_CINTS6/SAGE1/DDX26B/CT45 C-terminusFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029307
all species →		DomainINTS6/SAGE1/DDX26B/CT45, C-terminalInterproscan
IPR051113
all species →		FamilyIntegrator complex subunit 6Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12957
all species →		DEAD/H BOX POLYPEPTIDE 26/DICE1-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0032039
all species →		Cellular Componentintegrator complexInterproscan
GO:0034472
all species →		Biological ProcesssnRNA 3'-end processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_039247-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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