Gene detail

Detailed information of FUN_039280-T1 in Acropora pulchra

Genomic Location: ptg000028l:226463...236773
NR annotation: XP_015759049.1, PREDICTED: uncharacterized protein LOC107338329 [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_039280-T1

ATGGCATCGTTTTCAAGGCAGCCTCAAGTATATGATAGAACCATTAAAGTCACCATCTTGGCTTCCGAGTGGGGATCCAGTAAGGGTGGACTTTCCACTATAAACAGAGAGTTGGCTATTCAGTTAGCCAAATTTCCTGATGTTAAAGTCACTTTCTTTTTGCCACAATGCTCCCTAGAGAATAAGGCAATAGCGCTCAGCCATGGCATATCCATTATTGAAGCAGAGAGACGACCAGGGTATGAAAACCTCGATTGGCTCAGCTTTCCACCGGAAGATTTAAAGATAGATGTGGTTGTTGGTCATGGTGTGAAACTCGGCAAACAGGCTCAAGTTATCCGCGAGAGTCACAAATGCAAGTGGGTTCAAGTGGTACACACGGACCCAGAGAAACTAGGAATGTACAAATGTTATGAGAATCCAATCGCAAAGGGAGAACAAAAGCACAGTGTTGAGGTAGAGCTATGCCAGATGTCTGATTTGGTTGTTGGAGTTGGACACAAGTTAACAGAAACCTTTCGCAAGTACCTTCGCTGGTGTAAAAAAGATCAAAATGTTTTTGAGTTCACTCCTGGTGTTTTTGCTGATTTTGCCAGTGTTGAACAAGCTCAAGATGAAAGAGAAGACCACAGTGTTTTGGTATTTGGGCGCGGAGATGATGAAGATTTTAAGCTAAAGGGGTTTGATATTGCAGCAAGATCTGTTGCTGCATTACCTGACACACATCTGGTATTTGTGGGAGCACCTGATGGAAAAGAGCAGGAGATCGCAAAACTACTGCTTGATTCAGGAATTCCTAAAGAACGTCTTACTGTGAGGGGCTTCAAGGATCGAGAAGCTCTGAAGCGAGAATTCTGTGAGGCAGATCTTGTGCTAATGCCATCCAGAACTGAAGGGTTTGGTTTGACAGCTCTGGAGGCAATGTCAGCTGGACTTCCTGTAATCGTCAGCAAGAACTCAGGGTTTGGACAAGCTCTGGGCCGTGTTCTACCGGAGTCTTCATTTGTGATTGACTCTGAAGATCCCAATAAATGGACAGCAGCTATTAAGGGCACCTGGAACAAAGACAGACGGACACGACTTGATGAGACCAAGGCTCTGTGTGACTCCTATGAAAAGAGATACAGTTGGTCAGAACAGTGCAAAAATCTTCTTGATAAGATGGTCAGCTTACTTGAGAATAAAAAAGATGCTTTTGGCAGGAGTCAGATCTCATTCCATGAAGGTGTGGAAAGGAGAAGCGTATCCATTGAAGACAGTACAGGGGAAGCGAACACCCCGGCTAGAGAAGGAGATACCCTTCCAAAAGTTATCGAGAGATATGAAGAGAGCTTGCGCATTGCCAGGGAAGCAGACGACCGGGCTACAGAAGGATATATCTATTTCCATCTTGGAAACGTTTACGAATCGCACCGCGTTCTTCCAAAAGCTATCGACTGTTACGAAAAGGCTCTGACCAATGCCGGGAAAGCAGGCGATCGGGCAACAGAAGCAGATAGCTATTTCCAGCTTGGGTCCGTTTACAACTCCCGCGGTGATCTTACAAAAGCTGTTGAGTGTTATGAAAAGAGTTTGCACCTTAACAGGGGTAAAGGCGACCATAAAGAAGGAACAGTCTGTTTGAGTCTTGGGAAACTTTACGAATCCCAGAATGATGTTCCAAAAGCTATCGAGTGTTATGAAAAAGCTTCGAATGTTGCTAGGAAAACAGACGATCGGAAAATAGAAGGGATGGCCTTCTTATATCTTGGCATACTTTACCGTGACCGCAGTTCCCCCAGCGATCTTCCAAAAGCTGTCAAGTGTTTTGAAAAGGCTTCGAACAATGCCAAGGAAGCAGGCGATCTGGAGTTAGAAGGAAAAGCCTGTTTGAATCTTGGGCTGGTTTACTACGAATCCTGCAGCGATCTTCCAAAAGCTATGGAGTGTCTTGAAAAGGCTTTGAACTGTGCCAGGGAAGCTGGTGACCGGAGTGGAGAAGCAAGGGCCTATTTCGGTCTTTCGGCCGTTTACTGGTCCAGCAAAGATCTTCCAAAAGCTATCGAGTGTTCGGAAAAGGCTTTGGACATTGTCAGGGAAGGAGGCCACCCGGCTAACGAAGCAGAACTCTATCAGTCTCTTGGGATATTGTACTACCGCAACAATGATCTTCCAAAAGCTATCGATTGTTGGGAAAAGGCTTCGAACATTGCCAGGGAAGCAGGCGATCGGGAGATAGAAGGAAAAGCCTATTTGAATCTTGGGCTGGTTTACTACGAATCCTGCAGCGATCTTCCAAAAGCTATGAAGTGTCTTGAAAAGGCTTTGAACTGTGCCAGGGAAGCTGGTGACCGGAATGGAGAAGCAAGCGCATATTTCGGTCTTTCGGCCGTTTACTCGTCCAGCAAAGATCTTCCAAAAGCTATCGAGTGTTCGGAAAAGGCTTTGCCCATTGTCAGGGAAGGAGGCCACCCGGCTAACGAAGCAGAACTCTATCAGTCTCTTGGGATATTGTACTACCACAACAATGATCTTCCAAAAGCTATCGATTGTTGGGAAAAGGCTTCGAACATTGCCAGGGAAGCAGGCGACTGGGATACAGAAGTAAAAGCCTATTGTCATCTTGGGACGGCTTACCAATACCGTGGCAATCTTCCAAAAGCTATCGAGTGTTATGAAAAGGGTTTGAACATTGCCACGAAAACAGGCGACAAGCTGGTCATATTTCGTGCCTGTGAGAATCTCGAACGTTGTCACTTGGCCCTTGGCAACCTTTTGAAAGCTTCCGAGTATCGTAAAAAGAGTTTATCCAACCGAGTGGTGGCTCTTACTGAGGAGGCAACAGAGGGATCAGCCTGCAGCATCCAGGTGATCCCTCCTGAGATTAATCTACGTGGTCCCAGGGCCGTGGAGGCCCATAACAGGGCTCTTACAGAAGTAAGAAAGATTCCGGTCATGTCGATTGGACAGGACCGTTCAGGAAAAACAAGCCTAAAGAAGTCACTCCAGGGATTACGATTGAACCCAGATGAAGATAGCACTGTTGGGATAGATGTTGATCCATCCTACTTCAAAGAAACCACTGAGATATGGAAGACAGAGGAAACGGATCAAGCGGCAAACAAAGAGGAAATGGCTGCTTCTTTTGAGCGTCATGTGGCTCAAGTAGTTGTTGACAATCTAAGGGAACAAGAATTGACTTCTGAAGAAAAGACTATGATAATACATGACTATGCTTTTGACAGGAGTCAGATCTCAGTCCAGGAAGGAGTGGAGCGGAGAAGCATATCCATTGAAGACAGAACAGATGCTTTTGGCAGGAGTCAGATCTCATTCCATGAAGGTGTGGAGAGGAGAAGCATATCCATTGAAGACAGTACAGGGGAAGCAAGCACCCCGGCTAGAGAAGGAGATACCCTTCCAAAAGTTATCGAGAGATATGAAGAGAGCTTGCGCATTGCCAGGGAAGCAGACGACGGGGCTACAGAAGGATATATCTATTACCATCTTGGAAACGTTTACAAATCGCACCGCGTTCTTCCAAAAGCTATCGACTGTTACGAAAAGGCTCTGACCAATGCCGGGAAAGCAGGCGATCGGGCAACAGAAGCAGATAGCTATTTCCAGCTTGGGTCCGTTTACAACTCCCGCGGTGATCTTACAAAAGCTGTTGAGTGTTATGAAAAGAGTTTGCACCTTAACAGGGATAAAGGCGCCCATAAAGAAGGAACAGTCTGTTTGAGTCTTGGGAAACTTTACGAATCCCAGAATGATGTTCCAAAAGCTATCGAGTGTTATGAAAAAGCTTCGAATGTTGCTAGGAAAACAGACGATCGGAAAATAGAAGGGATAGCCTTCTTATATCTTGGCATACTTTACCGTGACCGCAGTTCCCCCAGCGATCTTCCAAAAGCTGTCAAGTGTTTTGAAAAGGCTTCGAACAATGCCAAGGAAGCAGGCGATCGGGAGTTAGAAGGAAAAGCCTGTTTGAATCTTGGGATGGTTTACAAATCCTGCAGATATCTTCCAAAAGCTATGGAGTGTCTTGAAAAGGCTTTGAACTGTGCCAGGGAAGCTGGTGACCGGAATGGAGAAGCAAGCGCATATTTCGGTCTTTCGGCCGTTTACTCGTCCAGCAAAGATCTTCCAAAAGCTATCGAGTGTTCGGAAAAGGCTTTGCCCATTGTCAGGGAAGGAGGTCACCCGGCTAAGGAAGCAGAACTCTATCAGTCTCTTGGGATATTGTACTACCACAACAATGACCTTCCAAAAGCTATCGATTGTTGGGAAAAGGCTTCGAACATTGCCAGGGAAGCAGGCGACTGGGATACAGAAGGAAAAGCCTATTGTCATCTTGGGAAGGCTTACCAATACCGTGGCAATCTTCCAAAAGCTATCGAGTGTTATGAAAAGGGTTTGAACATTGCCACGAAAACAGGCGACGAGCTGGTCATATTCCGTGTCTGTAATAGCATCGAACGTTGTCACTTGGCCCTTGGCAACCTTTTGAAAGCTTCCGAGTATCGTAAAAAGAGTTTATCCAACCGAGTGGTGGCTCTTACTGAGGAGGCAACAGAGGGATCAGCCTGCAACCTCCAGGTGACCCCTCCTGAGATTAACTACACTGTTGGGATAGATGTTGATCCATTCAAAGAAACCACTGAGATATGGAAGACAGGGGAAAAGGATCAAGCGGCAAACAAAGAGGAAATGGCTGCTTCTTTTGAGCAAGATGTAGCTCGCGTACCTGCTGACTTTCTAAGGGAACAAGAATTGACTTCTGAAGAAAAGACTATGGACAAATCGAAAGATCGTGAAAGTTCCCCGACAAGCGGACCGTAA

Transcript

FUN_039280-T1

GAGGTCTTTTGTCGTTCTATTGACTCTTGATGCAACTGTCAATCCATCGTAATAATGACTGACATTGTTTTATCACGTATTTCATTCATTTCTGTCACAGTTTAGTTTTATTTTATTTTGTTTTCTTTTTCATTTTCAAGGAGTTTGTACACTTCGGTCCAAGATACCGCCTCAGTCTGGGTAGTGGCGTAATTGACGTACATTTTCATGGCATCGTTTTCAAGGCAGCCTCAAGTATATGATAGAACCATTAAAGTCACCATCTTGGCTTCCGAGTGGGGATCCAGTAAGGGTGGACTTTCCACTATAAACAGAGAGTTGGCTATTCAGTTAGCCAAATTTCCTGATGTTAAAGTCACTTTCTTTTTGCCACAATGCTCCCTAGAGAATAAGGCAATAGCGCTCAGCCATGGCATATCCATTATTGAAGCAGAGAGACGACCAGGGTATGAAAACCTCGATTGGCTCAGCTTTCCACCGGAAGATTTAAAGATAGATGTGGTTGTTGGTCATGGTGTGAAACTCGGCAAACAGGCTCAAGTTATCCGCGAGAGTCACAAATGCAAGTGGGTTCAAGTGGTACACACGGACCCAGAGAAACTAGGAATGTACAAATGTTATGAGAATCCAATCGCAAAGGGAGAACAAAAGCACAGTGTTGAGGTAGAGCTATGCCAGATGTCTGATTTGGTTGTTGGAGTTGGACACAAGTTAACAGAAACCTTTCGCAAGTACCTTCGCTGGTGTAAAAAAGATCAAAATGTTTTTGAGTTCACTCCTGGTGTTTTTGCTGATTTTGCCAGTGTTGAACAAGCTCAAGATGAAAGAGAAGACCACAGTGTTTTGGTATTTGGGCGCGGAGATGATGAAGATTTTAAGCTAAAGGGGTTTGATATTGCAGCAAGATCTGTTGCTGCATTACCTGACACACATCTGGTATTTGTGGGAGCACCTGATGGAAAAGAGCAGGAGATCGCAAAACTACTGCTTGATTCAGGAATTCCTAAAGAACGTCTTACTGTGAGGGGCTTCAAGGATCGAGAAGCTCTGAAGCGAGAATTCTGTGAGGCAGATCTTGTGCTAATGCCATCCAGAACTGAAGGGTTTGGTTTGACAGCTCTGGAGGCAATGTCAGCTGGACTTCCTGTAATCGTCAGCAAGAACTCAGGGTTTGGACAAGCTCTGGGCCGTGTTCTACCGGAGTCTTCATTTGTGATTGACTCTGAAGATCCCAATAAATGGACAGCAGCTATTAAGGGCACCTGGAACAAAGACAGACGGACACGACTTGATGAGACCAAGGCTCTGTGTGACTCCTATGAAAAGAGATACAGTTGGTCAGAACAGTGCAAAAATCTTCTTGATAAGATGGTCAGCTTACTTGAGAATAAAAAAGATGCTTTTGGCAGGAGTCAGATCTCATTCCATGAAGGTGTGGAAAGGAGAAGCGTATCCATTGAAGACAGTACAGGGGAAGCGAACACCCCGGCTAGAGAAGGAGATACCCTTCCAAAAGTTATCGAGAGATATGAAGAGAGCTTGCGCATTGCCAGGGAAGCAGACGACCGGGCTACAGAAGGATATATCTATTTCCATCTTGGAAACGTTTACGAATCGCACCGCGTTCTTCCAAAAGCTATCGACTGTTACGAAAAGGCTCTGACCAATGCCGGGAAAGCAGGCGATCGGGCAACAGAAGCAGATAGCTATTTCCAGCTTGGGTCCGTTTACAACTCCCGCGGTGATCTTACAAAAGCTGTTGAGTGTTATGAAAAGAGTTTGCACCTTAACAGGGGTAAAGGCGACCATAAAGAAGGAACAGTCTGTTTGAGTCTTGGGAAACTTTACGAATCCCAGAATGATGTTCCAAAAGCTATCGAGTGTTATGAAAAAGCTTCGAATGTTGCTAGGAAAACAGACGATCGGAAAATAGAAGGGATGGCCTTCTTATATCTTGGCATACTTTACCGTGACCGCAGTTCCCCCAGCGATCTTCCAAAAGCTGTCAAGTGTTTTGAAAAGGCTTCGAACAATGCCAAGGAAGCAGGCGATCTGGAGTTAGAAGGAAAAGCCTGTTTGAATCTTGGGCTGGTTTACTACGAATCCTGCAGCGATCTTCCAAAAGCTATGGAGTGTCTTGAAAAGGCTTTGAACTGTGCCAGGGAAGCTGGTGACCGGAGTGGAGAAGCAAGGGCCTATTTCGGTCTTTCGGCCGTTTACTGGTCCAGCAAAGATCTTCCAAAAGCTATCGAGTGTTCGGAAAAGGCTTTGGACATTGTCAGGGAAGGAGGCCACCCGGCTAACGAAGCAGAACTCTATCAGTCTCTTGGGATATTGTACTACCGCAACAATGATCTTCCAAAAGCTATCGATTGTTGGGAAAAGGCTTCGAACATTGCCAGGGAAGCAGGCGATCGGGAGATAGAAGGAAAAGCCTATTTGAATCTTGGGCTGGTTTACTACGAATCCTGCAGCGATCTTCCAAAAGCTATGAAGTGTCTTGAAAAGGCTTTGAACTGTGCCAGGGAAGCTGGTGACCGGAATGGAGAAGCAAGCGCATATTTCGGTCTTTCGGCCGTTTACTCGTCCAGCAAAGATCTTCCAAAAGCTATCGAGTGTTCGGAAAAGGCTTTGCCCATTGTCAGGGAAGGAGGCCACCCGGCTAACGAAGCAGAACTCTATCAGTCTCTTGGGATATTGTACTACCACAACAATGATCTTCCAAAAGCTATCGATTGTTGGGAAAAGGCTTCGAACATTGCCAGGGAAGCAGGCGACTGGGATACAGAAGTAAAAGCCTATTGTCATCTTGGGACGGCTTACCAATACCGTGGCAATCTTCCAAAAGCTATCGAGTGTTATGAAAAGGGTTTGAACATTGCCACGAAAACAGGCGACAAGCTGGTCATATTTCGTGCCTGTGAGAATCTCGAACGTTGTCACTTGGCCCTTGGCAACCTTTTGAAAGCTTCCGAGTATCGTAAAAAGAGTTTATCCAACCGAGTGGTGGCTCTTACTGAGGAGGCAACAGAGGGATCAGCCTGCAGCATCCAGGTGATCCCTCCTGAGATTAATCTACGTGGTCCCAGGGCCGTGGAGGCCCATAACAGGGCTCTTACAGAAGTAAGAAAGATTCCGGTCATGTCGATTGGACAGGACCGTTCAGGAAAAACAAGCCTAAAGAAGTCACTCCAGGGATTACGATTGAACCCAGATGAAGATAGCACTGTTGGGATAGATGTTGATCCATCCTACTTCAAAGAAACCACTGAGATATGGAAGACAGAGGAAACGGATCAAGCGGCAAACAAAGAGGAAATGGCTGCTTCTTTTGAGCGTCATGTGGCTCAAGTAGTTGTTGACAATCTAAGGGAACAAGAATTGACTTCTGAAGAAAAGACTATGATAATACATGACTATGCTTTTGACAGGAGTCAGATCTCAGTCCAGGAAGGAGTGGAGCGGAGAAGCATATCCATTGAAGACAGAACAGATGCTTTTGGCAGGAGTCAGATCTCATTCCATGAAGGTGTGGAGAGGAGAAGCATATCCATTGAAGACAGTACAGGGGAAGCAAGCACCCCGGCTAGAGAAGGAGATACCCTTCCAAAAGTTATCGAGAGATATGAAGAGAGCTTGCGCATTGCCAGGGAAGCAGACGACGGGGCTACAGAAGGATATATCTATTACCATCTTGGAAACGTTTACAAATCGCACCGCGTTCTTCCAAAAGCTATCGACTGTTACGAAAAGGCTCTGACCAATGCCGGGAAAGCAGGCGATCGGGCAACAGAAGCAGATAGCTATTTCCAGCTTGGGTCCGTTTACAACTCCCGCGGTGATCTTACAAAAGCTGTTGAGTGTTATGAAAAGAGTTTGCACCTTAACAGGGATAAAGGCGCCCATAAAGAAGGAACAGTCTGTTTGAGTCTTGGGAAACTTTACGAATCCCAGAATGATGTTCCAAAAGCTATCGAGTGTTATGAAAAAGCTTCGAATGTTGCTAGGAAAACAGACGATCGGAAAATAGAAGGGATAGCCTTCTTATATCTTGGCATACTTTACCGTGACCGCAGTTCCCCCAGCGATCTTCCAAAAGCTGTCAAGTGTTTTGAAAAGGCTTCGAACAATGCCAAGGAAGCAGGCGATCGGGAGTTAGAAGGAAAAGCCTGTTTGAATCTTGGGATGGTTTACAAATCCTGCAGATATCTTCCAAAAGCTATGGAGTGTCTTGAAAAGGCTTTGAACTGTGCCAGGGAAGCTGGTGACCGGAATGGAGAAGCAAGCGCATATTTCGGTCTTTCGGCCGTTTACTCGTCCAGCAAAGATCTTCCAAAAGCTATCGAGTGTTCGGAAAAGGCTTTGCCCATTGTCAGGGAAGGAGGTCACCCGGCTAAGGAAGCAGAACTCTATCAGTCTCTTGGGATATTGTACTACCACAACAATGACCTTCCAAAAGCTATCGATTGTTGGGAAAAGGCTTCGAACATTGCCAGGGAAGCAGGCGACTGGGATACAGAAGGAAAAGCCTATTGTCATCTTGGGAAGGCTTACCAATACCGTGGCAATCTTCCAAAAGCTATCGAGTGTTATGAAAAGGGTTTGAACATTGCCACGAAAACAGGCGACGAGCTGGTCATATTCCGTGTCTGTAATAGCATCGAACGTTGTCACTTGGCCCTTGGCAACCTTTTGAAAGCTTCCGAGTATCGTAAAAAGAGTTTATCCAACCGAGTGGTGGCTCTTACTGAGGAGGCAACAGAGGGATCAGCCTGCAACCTCCAGGTGACCCCTCCTGAGATTAACTACACTGTTGGGATAGATGTTGATCCATTCAAAGAAACCACTGAGATATGGAAGACAGGGGAAAAGGATCAAGCGGCAAACAAAGAGGAAATGGCTGCTTCTTTTGAGCAAGATGTAGCTCGCGTACCTGCTGACTTTCTAAGGGAACAAGAATTGACTTCTGAAGAAAAGACTATGGACAAATCGAAAGATCGTGAAAGTTCCCCGACAAGCGGACCGTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
D1BD84	D-inositol 3-phosphate glycosyltransferase OS=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) OX=446469 GN=mshA PE=3 SV=1
D5UJ42	D-inositol 3-phosphate glycosyltransferase OS=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / BCRC 11376 / JCM 18109 / NBRC 3775 / NCIMB 8073 / NRS 134) OX=446466 GN=mshA PE=3 SV=1
A1R8N8	D-inositol 3-phosphate glycosyltransferase OS=Paenarthrobacter aurescens (strain TC1) OX=290340 GN=mshA PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000025 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20706 all species →	GT4-conflict	Family 4 Glycosyltransferase in conflict systems	Family	Interproscan
PF08238 all species →	Sel1	Sel1 repeat	Repeat	Interproscan
PF14938 all species →	SNAP	Soluble NSF attachment protein, SNAP	Repeat	Interproscan
PF13424 all species →	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR006597 all species →	Repeat	Sel1-like repeat	Interproscan
IPR052386 all species →	Family	G-protein-signaling modulator	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45954 all species →	LD33695P	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_039280-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.