Detailed information of FUN_039904-T1 in Acropora pulchra

Genomic Location: ptg000031l:1534443...1539953
NR annotation: XP_029205411.2, gamma-butyrobetaine dioxygenase-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9QZU7Gamma-butyrobetaine dioxygenase OS=Rattus norvegicus OX=10116 GN=Bbox1 PE=1 SV=1
Q5R5D8Gamma-butyrobetaine dioxygenase OS=Pongo abelii OX=9601 GN=BBOX1 PE=2 SV=1
Q924Y0Gamma-butyrobetaine dioxygenase OS=Mus musculus OX=10090 GN=Bbox1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000823 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06155
all species →		GBBH-like_NGamma-butyrobetaine hydroxylase-like, N-terminalDomainInterproscan
PF02668
all species →		TauDTaurine catabolism dioxygenase TauD, TfdA familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038492
all species →		Homologous_superfamilyGBBH-like, N-terminal domain superfamilyInterproscan
IPR050411
all species →		FamilyAlpha-ketoglutarate-dependent hydroxylasesInterproscan
IPR010376
all species →		DomainGamma-butyrobetaine hydroxylase-like, N-terminalInterproscan
IPR042098
all species →		Homologous_superfamilyTaurine dioxygenase TauD-like superfamilyInterproscan
IPR003819
all species →		DomainTauD/TfdA-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10696
all species →		GAMMA-BUTYROBETAINE HYDROXYLASE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0045329
all species →		Biological Processcarnitine biosynthetic processInterproscan
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_039904-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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