Detailed information of FUN_040069-T1 in Acropora pulchra

Genomic Location: ptg000031l:3831999...3836400
NR annotation: KAJ7388973.1, Shieldin complex subunit 2 [Desmophyllum pertusum]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009323 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15793
all species →		SHLD2_CShieldin complex subunit 2, C-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012340
all species →		Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR029715
all species →		FamilyShieldin complex subunit 2Interproscan
IPR031589
all species →		DomainShieldin complex subunit 2, C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14495
all species →		SHIELDIN COMPLEX SUBUNIT 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0010569
all species →		Biological Processregulation of double-strand break repair via homologous recombinationInterproscan
GO:0035861
all species →		Cellular Componentsite of double-strand breakInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K26129SHLD2; shieldin complex subunit 2-DNA repair and recombination proteinsko03400deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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