Gene detail

Detailed information of FUN_040217-T1 in Acropora pulchra

Genomic Location: ptg000031l:5599194...5608605
NR annotation: XP_029182905.2, stomatin-like protein 2, mitochondrial [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
H2FLJ1	Stomatin-like protein stl-1 OS=Caenorhabditis elegans OX=6239 GN=stl-1 PE=2 SV=1
Q99JB2	Stomatin-like protein 2, mitochondrial OS=Mus musculus OX=10090 GN=Stoml2 PE=1 SV=1
Q4FZT0	Stomatin-like protein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Stoml2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000607 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01145 all species →	Band_7	SPFH domain / Band 7 family	Family	Interproscan
PF16200 all species →	Band_7_C	C-terminal region of band_7	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036013 all species →	Homologous_superfamily	Band 7/SPFH domain superfamily	Interproscan
IPR001972 all species →	Family	Stomatin/HflK family	Interproscan
IPR001107 all species →	Domain	Band 7 domain	Interproscan
IPR032435 all species →	Domain	STML2-like, C-terminal extension	Interproscan
IPR050710 all species →	Family	Band 7/mec-2 domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43327 all species →	STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0007005 all species →	Biological Process	mitochondrion organization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K26392	STOML2, SLP2; stomatin-like protein 2	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.