Gene detail

Detailed information of FUN_040973-T1 in Acropora pulchra

Genomic Location: ptg000033l:739343...753731
NR annotation: XP_044171120.1, uncharacterized protein LOC114950440 isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

FUN_040973-T1

ATGTCACAGAACTATTCAGCTAGCGACAGCGACAGCGACTCTGCTGCAACTAACGGAGCACCACCGAGGCGGTACAATCGACGAGCATTCTCAAGAACATTTGTTCATATAGAAAAGCGTCTTAAAGCCGCACCGAGTAAAAACGCGTTGTCGAAGTTGAAAGACATGGGGAGGGTAAAAGAAATCGCGTTCACGAAGAATCATTCATCTGCCGAAATAAAGCAGTTGTTGACGTCTCATTTTCCAACCCTGGGCAATCTTGATATGGCACGTTTACGAATTATCAGCTCTTATGACAGGGGACATTCTATGAGCGTTGTTCACGAAGGTGTTCCCAATGGGGAGAAAATCATGCAACTTTTTGGTGGGGACGCCAAGAAAAAAGTCTTTTTATACTGGAGCCCAGGTCCATCTTCGTCCAGCGTACCTGCAGTCTCATCACCCTGCACCTCTACAGTCACCTCAACTACAAACGCAGTCACATCTTCCTCATCATCTACCATCGGATCATTCCATATGTCAACACCTGCACCCAACCATGCCACATCATCAACATCCACCATTTCATCTACTAACAGCTCTTCAACAACCACTACATCCACCCTGGCAGCCCCTGTGTCATCAGGCAGTCCAACTTTAGCTTCAATTGCTTCTCCAATGTCAAGACCCACCAACAGCCGTGAGACGAGAAGATACCTTGAGCATTTGGCAACAGAAGCTGAATTGTTGCAGAGTCCATTTTCACATGATGTCATAGAGATAGATGATCCGTCACCACAATGTTCATCATTACTTACGACATCACGATCAGATGAGGTGGTAGGGTGTCAAAGACTCTTACAAACAGGCAGTGACCAGACAGCAATGCTACCATTCTTAATTCACTCTTTTGATGAGTTATGCTTTCAAGCAGGCGAGAACAACAGAGGAATAATAGTTGTTCTCTTGAACACAAAAATTACAAATGAGGCAAATCGAGGAGCTCTATTGAGGGTGCTTCATAAACTAGAAACTGCAGAAGGCAAGAATTGGCTTTTTTGGGTGTCAAGCACTTGGTCCAGTGATGGCACAAAAGTTATTGACTTGTATGGTGGAGATCAAAAGCAAGATAGGCTCCTTTTTCTTGCACCATCAACAGGCAGAAATGCTACCTTACTGGGTGAAATTTCAGATACCGACACAGAATCAAATCAAATTGACTCCATGTTGAAAAAGATTATAGAAAGGGCTGAACTACGAATTATGGGACAACGGCAACAAAGAGAGCAATATGCAACGTGGAGAAGAGAAAGGAAGGAGCAAGAAGAAGAGTTTGCAAGAGTCCAAACACAGGAGTATGGAAAAGGGAATCAAGAAGAACAGGAGCAAGAAACCAACAAAGACACTGAAGTAAGTCGCATCAAAGGGAATCAAGAAGAACAGGAGCAAGAAACCAACAAAGACACTGAAATTAGAAAAGCAAGGAGATTAATGACAAGTGAAGAACCACTGTCTGGGACTACCATTGTCATCAGGTGCAACGATGGTGAAAGAGTGCATCGCAAGTTCCAGGAAAATGCTTGCTTTCAGGAAGTATATGACTGGCTAGGATCATTAGAAGATATACCATTGTATTTTACCCTGCAAAGGGGAAAAACAGTGGTTGAACACACAGACATCCTCCAAGGGAGTGAAGTTTTAGACCTTTTACCATATGATTACAAGGAAGTCAGAGAGGTGTTTTCAAATGTGGAGGAAAAAATCAGAGAAGTACGAAGGAAGCGTGTGTCGGTGGCTCCATTGAAAGATGGGCTGAAGGAAGTTTATGACTGGGCTGGGTCGATGGAAGATGTACCTCTTCACTTTACTATCCATCGTGGAGGAAAATTAGTTACACATGAATCCCCAATTGACGACCACTGTGCAGCAACCCTGGTGAAAAGAGCAGCAGAAGAGGCTGCACAGATGTTGAGTTCACAGGTTTCATTTTATGGCAGTTACACAATTCTTGGACCTCAAGAACTATCTAATACATTGCCTGATGATAGCCAAGCAACACAAGAACAACTGCCAGAAGATGGTGACATTATAAAAGAAAAGAAAAGGAGAAAGGACAAACGAACCACTTCGGAAAGAAAGAGAGCAAAGAAAGAGAAATCTGCAACTGCTTCAACTGAAACTGACTGA

Transcript

FUN_040973-T1

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00789	UBX	UBX domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050730	Family	UBX domain-containing protein	Interproscan
IPR001012	Domain	UBX domain	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23322	FAS-ASSOCIATED PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005783	Cellular Component	endoplasmic reticulum	Interproscan
GO:0030433	Biological Process	obsolete ubiquitin-dependent ERAD pathway	Interproscan
GO:0043130	Molecular Function	ubiquitin binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan