Detailed information of FUN_041297-T1 in Acropora pulchra

Genomic Location: ptg000035l:1575110...1576873
NR annotation: XP_044169110.1, structural maintenance of chromosomes protein 4-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P50532Structural maintenance of chromosomes protein 4 OS=Xenopus laevis OX=8355 GN=smc4 PE=1 SV=1
Q8CG47Structural maintenance of chromosomes protein 4 OS=Mus musculus OX=10090 GN=Smc4 PE=1 SV=1
Q9NTJ3Structural maintenance of chromosomes protein 4 OS=Homo sapiens OX=9606 GN=SMC4 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002657 (this species only)

 Pfam domain
No Pfam domain signature was detected for FUN_041297-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR036277
all species →		Homologous_superfamilySMCs flexible hinge superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18937
all species →		STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0005694
all species →		Cellular ComponentchromosomeInterproscan
GO:0051276
all species →		Biological Processchromosome organizationInterproscan
GO:0000799
all species →		Cellular Componentcondensin complexInterproscan
GO:0007076
all species →		Biological Processmitotic chromosome condensationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_041297-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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