Detailed information of FUN_041567-T1 in Acropora pulchra

Genomic Location: ptg000035l:5351829...5368650
NR annotation: XP_029186174.2, protein capicua homolog [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96RK0Protein capicua homolog OS=Homo sapiens OX=9606 GN=CIC PE=1 SV=3
Q924A2Protein capicua homolog OS=Mus musculus OX=10090 GN=Cic PE=1 SV=2
Q9U1H0Putative transcription factor capicua OS=Drosophila melanogaster OX=7227 GN=cic PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003655 (this species only)
Transcription factor familyHMG · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505
all species →
HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009071
all species →
DomainHigh mobility group box domainInterproscan
IPR052412
all species →
FamilyCell Cycle and Developmental Transcription RegulatorsInterproscan
IPR036910
all species →
Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13059
all species →
HMG-BOX TRANSCRIPTION FACTOR BBXInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000977
all species →
Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0006357
all species →
Biological Processregulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K20225CIC; capicua transcriptional repressor-Transcription factorsko03000deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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