Gene detail

Detailed information of FUN_041680-T1 in Acropora pulchra

Genomic Location: ptg000035l:6477020...6486311
NR annotation: XP_029190272.2, abnormal spindle-like microcephaly-associated protein homolog [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003295 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02197 all species →	RIIa	Regulatory subunit of type II PKA R-subunit	Domain	Interproscan
PF00612 all species →	IQ	IQ calmodulin-binding motif	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR047579 all species →	Domain	CABYR/SP17, dimerization domain	Interproscan
IPR000048 all species →	Binding_site	IQ motif, EF-hand binding site	Interproscan
IPR051185 all species →	Family	Abnormal Spindle-like Microcephaly-associated	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003117 all species →	Domain	cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22706 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0000278 all species →	Biological Process	mitotic cell cycle	Interproscan
GO:0000922 all species →	Cellular Component	spindle pole	Interproscan
GO:0005516 all species →	Molecular Function	calmodulin binding	Interproscan
GO:0007051 all species →	Biological Process	spindle organization	Interproscan
GO:0051295 all species →	Biological Process	establishment of meiotic spindle localization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_041680-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.