Gene detail

Detailed information of FUN_041707-T1 in Siderastrea siderea

Genomic Location: contig_53:1031192...1076690
NR annotation: no NCBI-NR hit recorded
Species Siderastrea siderea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_041707-T1

ATGGCCACTGCAAGAGAAATTCCCGAAAAAGAGACCCAGAgaaaagaaattatacaagataTGAAGACGCCGTTACGCATAGGAGATACTTGGTACCTTGTTGACTGTCGCTGGTTTAAACAGTGGAAGAAGTATGTTGGATTTGATACAAGGGATCAGTTTGGTGCTGGTGATGAACAGAATAATCCTGGCCCTATAGATAATTCAAACCTTTTAGAAGCCGATGCCCGTACTCTAAAGAAACATCTCATAGGTGAGCTTGATTATGATCTGCTTCCTGAAGAGGGGTGGTTTCAGCTTGTATCATGGTATGGAGTGACATCAGATCAACAAGCTCTACCAAGGAAAGTGGTGGAACACGGACTGTATGTGAAAAACTTTAAGGTTGAAGTATATCTGTTGGAATTCAAACTCTCACAGCATTCAGATCCTGAAGCCTTGATCACGAGGGAGTTTAGTAGGGGAGACACTATAGGTCAGGTTATGTCAGAAATGAAAAAAGTGTTCAACATACCACAGGACACTGAAACACGAGTGTGGAAGGAGAACATGTACGTACTGCTTACTAATCTGGAACAGACGGTGGAAGATGCTAGGCTTTGTCATGGGCAGATTCTTGTAATAGAGCAAAAGAATGAGGATGGTACTTGGCCAATTAAAAGcgCCAAGTCAGCGAAACGGGAAATGTTAAGGGAAAGTTTAAtggaaaagtacaaagaaatcaaCTCAGAAACAATAAAAGCAGCAGCAAAGAAAGCACCCTTGAAACGGAATGATATGCTGCAGCCAAAGCCAATGAATAATGACAGAAGCAGAAGTTCAGATTcgtatttatttttcttagaATCCTTACGAAGGCATTCTCGTGATCTGGAGGAACAGTCGAGTCATTTTCAaggacagttaaaagaaaaagaagaacgtGAAACCAATCATCTTCAACAGTTAACAGCGACAGAAGAACAATTAAGTGAAAAAGAAGAACTTAAAACAAAATTGGAGAGCACAGAGCGAGAGTTGAAAAATTGCCGAGAACAATTACTTAAAAAACAGGGTCAGTCAAATTATTTGGAAGAAAAATTAAGAGAAAAAGAGGAGCAGTTGAGGGAAATCGAAAGCTTAAGAAGAAAGTTAACAGAGCGAGATAGACAAGCCGAAAATTTGCGAAGACAATTAAATGAGAAGGAGCTACAATTGACAAACTTACGGGCTGATAAAGAGAAAGCTAGGGTGAAGCTTGAAAAACAACTCAGGGACCGGGAACATGATTGTGTGACACTAGAAAGAGATCTTTCAACAGCTAAGAAAACATTGGTTGAATATGAATCCCAGTTAAAGCAGCGTGACTGGGTGATTTCTCGAGATGACATTCAAATTACAGATGCGTGCCTCGGGGAGGGAGGATGGGGACGTGTTGTCAAGGGCTGGTACTGTGGCTGTGGTGTAGCTGTAAAATATCTTCATAAATCGACTCTCACTCCTCAAGAGCGAACTTTGTTTGAAAGGGAAATGGACATTGCGTCAAGGTGCCGCCATCCTTGCCTATTACAGTTCATTGGAGCAACCAAAGATGAGAAATTAAGTCCTTTGTTTGTCACTGAGCTGATGGAAACAAGTTTACGAGCGTTATCAGCGAAGTGTAAACTTTCTGAAGCAGAAATCACTGTTATTTCTCTGGATGTAGCTCGAGCACTTAACTACCTTCACCAAAGGAAACCTATTCCCATTGTTCACCGGGATGTCAGCAGTGCTAATGTGTTGTTATGGCGACACAGAGACCAATGGAGAGGCAAAGTGTCAGATTATGGCACTGCTAAGTTCGTGCAAGGGATCATGACAGTTGCTCCTGGCGCTTTGATTTACAGTGCGCCTGAAGCAGGCGTTCCTTATAATCAAACAGTCAAGATTGATGTCTACAGTTTTGGCGTCTTACTTTGTGAAATGTGTATCGACGAATTACCAGACCCTGACACGCGTGACGAGCAAGTGGCGAAGGTGGGGAATCGTGAGTTTCGAAGCTTGATACTGTGGTGTCTGGAGGAAGACCCCGGTATGAGACCAGATATGGAACAGGTTGATGTTTACAGTTTTGGCGTTTTTCTCTGTGAGATGTGTATCCGACAACAACCAGACCAAGAACAGCGTCCAAGTCAAATAGCCCGGATGACAAACGTGCGTTTTCGAATCCTCGTGTCTCGCTGTGTACGGGAGCAGCTTGTGGAGAGGCCAAATATGGAAGAGATTATTGAAGAACTGGAGCAGTTTATATTATTTTAG

Transcript

FUN_041707-T1

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06337 all species →	DUSP	DUSP domain	Domain	Interproscan
PF14836 all species →	Ubiquitin_3	Ubiquitin-like domain	Domain	Interproscan
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006615 all species →	Domain	Peptidase C19, ubiquitin-specific peptidase, DUSP domain	Interproscan
IPR035927 all species →	Homologous_superfamily	DUSP-like superfamily	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR008266 all species →	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR050167 all species →	Family	Serine/threonine-protein kinase	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR028135 all species →	Domain	Ubiquitin-like domain, USP-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23257 all species →	SERINE-THREONINE PROTEIN KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004843 all species →	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_041707-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.