Gene detail

Detailed information of FUN_041823-T1 in Acropora pulchra

Genomic Location: ptg000035l:7992877...8012593
NR annotation: XP_029188390.2, dynein axonemal heavy chain 2-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_041823-T1

ATGAATTTAGACCTAGAAGACGAAATAAGTTTACATGGTGGCGCTTCCGAAGTTGGTTCTGAAGCAGCAGGAGCAGTTTCTGTCTCGGAGTCTTTGTTGACAGTCCCAGACGAGAACAAAAATGGCCTGTCGAATTCTTCCTCCGAGACTGGTGTGGAAGTCGACAGATCGCGTCACGGCAGTGGTGCTTCGGAGAGTGAAAAAGTATTTGAACCCATGGAAATGGTGCCATTAATTAAAGAGAGAGTGACATTAAGCGGCCTGAAATCTGATATGTGGACTGTAGAACATGATACAACTATTATCAAGTTTTTGAAGGACTACACACATAGACTTCTCATAGTCTATATTGACAAGCTACTGGGATTACAAGTCGCATTATCTATTCCTCCATATGCAGTTGAAGAGATGACCTACATGATAAGGTCTGAAAACGCTGTTATCACACCCGATAACCTTGAAAGCAAGCTTCATTTTGGTACAATCAAAGCAAACCATATTGAAAGCCTGTTAAGGACGATGACAAATGTGTATGCGCCGTTGTTCTTTGGTAACCAATCATGGCCAGATAGCATAAAAAATGACTTCTCAGCCCAACTGCAGAAATTCATGGCCAACCTGACAGACACAAGGTATAAAATGCAAGGCAAGACAGTGCTGTATGTGCCAAACGAAGGATCAAGGCTGTCTGTTGAAGAGGCTGCAAAGAGTAAAGAATTTGTTCAACGTCTTGAAACTGCAATGATTCACTGGACCCGGCAAATTAAGGAGGTCTTGAGTAGTCAAGACACGTTTGAAGCTGCTGAAAATTCAGGACCTTTGGAAGAGATAGAATTCTGGCAAAGTCGTTGTGCTGACTTGTCAGGCATTAGTGACCAATTGGACAAACCTGGAGTAAAAAGAATACAATCAGTTTTGGAACAGTCCAAAAGTTCTTATGTTGCACCATTTCTCAAACTCTCAAAACTGATTCAGGATGGATCAGCTCAAGCACAGAGCAATTTAAAGTTTCTGTCAACACTAAAAGGACCTTGTGAAGATCTGGCTCAAGCACAACCCAAAGAAATTCCTGCCATGCTGACTCAAATTTTGAACATTATCCGTATGATCTGGATAAACTCTGAACATTATAAGAGCAGAGAGAGGCTCACTGGCCTTCTCAGGAAGGTAAGCAATGAAATAATCAGGAGATGTAGTACTAAAATCTCATTAGATGACATCTTTGAAGGACGAATCAAGACTAGCACAGAGGGACTACAGGAGAGCATTGAATGCTGTGAATCATGGAAAGACACCTACAGTAGGATCAGTAGGATGCATTCCAAGCTATCAAGCGAGAGGTGGATTCTTGATCAGAGCAGCATTTTTGCTCAAGTAGATGCATTTGTACAGCGTTGCAAAGATCTTCTGGAGGTCTGTGACGGGCAAATTCATTTTGCAAGATTGTATGATGGAGAGAAGACACCATTGCCATGCTTCCATGGTGTGCGAGGACCAGAAGTAGTTAGAAGTCTGCTTGAAATTGAAGCCACGTTTGAAAAAAATCTTCAGATCCTCAAGGATGTCAAGAAAACTATTTTAGATGTGAAGGCAACAACATGGCATGATGATTACAACAGGTTCCGTGCTGGTGTAAAGGATTTGGAAGTAATGGTCCAGAATTTGATATGTTCTGCCTTTGAAACTGTAACAACTGTTCAGGAAGGAGTGGAAATCTTGGATATTTTCCAGCATTTGTCTTCAAGAGAGGCTATCAGGCGAACAATTGACAAGAAAACAGTGGAGGTGTACCAGCTTTTCAATGAAGAATTGAACCTTGTGAAGAAAGAATTCAACACCAAGACTGTTGATTTGCCACCAATGTATCCACATTATGCTGGCTCTGCTGCATGGGCCAGGATGTTGAAGAGAAGGGTAGACAGGCCAATGAATGTTTTAACTAAGGCTTTCTTCCTTCCTCTCATTGGGACTGGTGAGGAAATCAGGTCACAGTATCGACAACTGGCTCAGGCTCTTGATGAGTTTGTGAGAAAGACATTCAACGAATGGACTTCCATTGTGGATAAAGAGGCAACAAGACTTCTTGAAATCCCATTGATGCGCCGTAGCCAGGATAAATCAGGGACACTTGATCTGAATTTTGATAAAACTCTTGTGAAGCTGTTCAATGAAATACATTATTGGGAGAAGTTAATGTTTGAGACACCCCACTATGTATCTGAACTGTGCACAAAGAAAGAAGACCTTAGAATCCTCAGAGAAAATGTGCTGCTTGTTGTGCGTGACTACAACAGGATCATAGCTGTCCTGTCAACAGAGGAACGTGGTTTGTTCAGAGAGAGAATAAGATCATTAGATAAGAAGATCCATCCAGGCCTTACAAAGCTTACTTGGGCATCCAAAGGAATCTCTGATTACTTCATTGGAGAGTGTAGAAATAACTGTAGTAAGGTGCAAGATATTGTAGACGACTACAAAAATGCAAACTTGACCATTTCCAAGAATTGCAAAAAGATCAGTGAAATGTTGCTGGTTAAGATTGATGGCAAAAGAGTTTATGACAACCTGGAATTTGAGGATGAACAGAAAAATCATGGCAGTAATGTACAGGCAAGACTTCAAGTCATTCATATGGAAGTTGTCAGCATCATGAAACAGACCTATGAGGTTTTCAAGCATGATGGACAAGAGGTAGATGGTAGCAATAATTTCATCTTTTACTTTGTCTGCAAGGTGCAAGCTCACTGGCTACGCTACACAGAGAAAATTGATCGTATGGTTGAAGAAGCATTCAGGCTGAATGTGAAGTGGTCACTACAAGAGCTGTCCAGAGCTATTAACGGGGATGGAAAAAGTGCTCCAAACCCTCTTCTTAGGGTGAAAGTTGTCTTGGAGGGAGACAAGGTTGAATTTTCCCCTACTTTAAAGAAGCTTGCTAGCATGATGGAGAACATTGCAGTTCAGCTGACTGCATGTCTGGCCATTTTTCAAAGACTTCCAGACCTTCTAACAAAGAAAAGGTCAAGTAAAGAGCCTGTTTATGTCATCATTGAAAGAGATGATGAGACAAAGAAGATCCAAGCCAGCATAAAGGCTGGCATGTCAGCTAATGCTTCCCATCTGCAGGCATACCTCAGTACCTGGGATAGTTACCGTGAGATCTGGGAGATACAGAAAGATGCTTTTATCAGAAGATATCAACGCCTCAACCCTCCTGTGTCATCCTTTGATGCAGACATTTACAGGTACACAGAAATTGCGAACAACTTTCAGAAGGAGGAAACTGTTCTAAATATTGACTTTGTCCTCTTGGATAACTCGCCACTAAAGTTTGCACTTCTTGGCCACTGCAATGAATGGCAGAGCAAGTTTACCACTCTGTTACGAGAGATGGGAAGTCAAAAACTACTGGAGCTGCATAACTTCTTGAAGGACAATGCTAAGAAACTCAGTGCTCCTCCTGAAACTCTTGATCAGCTTGGTGAAAGCCTTTCTCTTTTGGAGCAACTGCAACAGGACTTGCCCAACATTGAGGCTAAGTTTCCTCCACTTCACCAACAATTTGCCATTCTCGAAAAGTACGAAGTGGCAATTCCAGAAGAGGTGCAAGAGATGTTGGACCAGTTGAGTGGTGAATGGGTTGCATTCCAGCAGTGTCTGATTGATAGTGATGCTATGTTGAAGAAAAGCAAGGAGAAGTTCAAGACAGGACTTATTCACTCTTCTGAAGAATTCAAGAAAACAGTTTCAACATTGTTTGACGAGTTCCATAACAGAGGCCCATTTAGTAGTTCAGTCTCTGTGAAGGAGGCCCTGGAAGAAGTTAAGATCTATGTGGAACAAGTGGGCAACTTGAAATCACAAGAAACAAAGCTTAGGCGAGGGCTCAACATCTTCAAGATTGAACAGCCACCATCAAAGGACCTACAAGGTGTAGAAAAGGATTTGGAACATCTTGAACAAGTGTGGGCTGTGACCAAGGAATGGGAGGAACTCTGGGATTCCTGGAAAGTTGGCAAGTTTGAAGAACTAGTCACAACTGACATGGAAACAACATCGCAGTTGCTGTTCAAAAGGCTAAACAAGCTGATCAGAGAAGTAAAGGACAAAAACTGGGAGATTTGCGACTCTATCAAATCTCGTATCGAGCAGTTCAAACGTACCATGCCTTTGATCCAAGATCTAAAGAACCCAGCTATGAGGGACAGGCACTGGGCACAGATTAAGTCAGAGGTTCAAAAGCCTTTTGATCACAGTGCTGAGGACTTCACTCTTGAAAAAATCATTGATCTTGGTTTGGACCAGTTTGCTGAGCAGATAAGCGAAGTGTCTGGTGCTGCAAGCAAGGAGCTATCCATAGAACAGGCAATTGCAAGCATTGCAGAGAGCTGGGAGCAGATAACACTGGATATTGGACCTTACAAGGACCGTGGACATTTCAGGCTCAAAGCAACAGATGAAGTGTTTCAGCAGTTGGAGGATAATCAGGTCACTTTGTCAACAATGAAAGCATCACGTTACGTCAAGGCTTTTGAGACAGAGGTCGACCAGTGGGAACGAACCCTTTCCCTGATACTGGAGGTTACTGAAATGACCCTGACAGTTCAACGACAGTGGATGTATTTGGAGAATATTTTCCTTGGTGAAGACATTCGCAAACAGCTCCCAAGAGAGTCAGCAGAGTTTGATGATGTTAATGCTAACTGGAAGGTGATTATGCAAAGGCTCAACAAGGATAACAATGCATTGCGAGGAACTCATCATCCAGGCCTGCTTGACACACTGAATGACATGAATTTGAAACTGGAAGAGATCCAAAAATCTCTTGATATGTATTTGGAGACAAAGAGGCAGATCTTCCCACGCTTCTACTTTCTCTCCAATGATGATCTTTTGGAAATACTTGGACAGTCCAAAAATCCTGAAGCTGTAAGTACTGTTCATGATAAACTGCAGCAGCAGAAGCCAGTTAAAGCATATTACTATAGCTTTGAAAATAACAATCTCAGGTGTGGAGTGGTGTAG

Transcript

FUN_041823-T1

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9P225	Dynein axonemal heavy chain 2 OS=Homo sapiens OX=9606 GN=DNAH2 PE=1 SV=3
P0C6F1	Dynein axonemal heavy chain 2 OS=Mus musculus OX=10090 GN=Dnah2 PE=1 SV=1
Q9MBF8	Dynein-1-beta heavy chain, flagellar inner arm I1 complex OS=Chlamydomonas reinhardtii OX=3055 GN=DHC10 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000142 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08393 all species →	DHC_N2	Dynein heavy chain, N-terminal region 2	Family	Interproscan
PF08385 all species →	DHC_N1	Dynein heavy chain, N-terminal region 1	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042222 all species →	Homologous_superfamily	Dynein heavy chain, domain 2, N-terminal	Interproscan
IPR013602 all species →	Domain	Dynein heavy chain, linker	Interproscan
IPR042228 all species →	Homologous_superfamily	Dynein heavy chain, linker, subdomain 3	Interproscan
IPR026983 all species →	Family	Dynein heavy chain	Interproscan
IPR013594 all species →	Domain	Dynein heavy chain, tail	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10676 all species →	DYNEIN HEAVY CHAIN FAMILY PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005930 all species →	Cellular Component	axoneme	Interproscan
GO:0007018 all species →	Biological Process	microtubule-based movement	Interproscan
GO:0008569 all species →	Molecular Function	minus-end-directed microtubule motor activity	Interproscan
GO:0030286 all species →	Cellular Component	dynein complex	Interproscan
GO:0045505 all species →	Molecular Function	dynein intermediate chain binding	Interproscan
GO:0051959 all species →	Molecular Function	dynein light intermediate chain binding	Interproscan
GO:0060294 all species →	Biological Process	cilium movement involved in cell motility	Interproscan
GO:0097729 all species →	Cellular Component	9+2 motile cilium	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10408	DNAH; dynein axonemal heavy chain	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.