Gene detail

Detailed information of FUN_041932-T1 in Acropora pulchra

Genomic Location: ptg000035l:9013540...9027251
NR annotation: XP_029186614.1, tyrosine-protein kinase HTK16-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_041932-T1

ATGTGTTCTTACTCTGGTGATTGTAACTGGTATCACGGGCGAATTACACGTGAGCAAGCAATCGATCTCTTGCTCCAAAATGGCGGACAGGAGGGTCTATTCCTTGTCAGGGACAGAGCTGGGTCTGACAATTTTGTATTGTCCTTATGGCACGGAAATCAAGCGCTCCATTTTCAAATTCAATGTCGCGGTGGAAAGAATTTTTCAATTGACGATGGTCCGACTTTTGAAGGTTTGGATTCGCTGATTGAGTACTACGTTGACCAGGCTGATGGACTGCCTATCCGACTTGGGCCGTTTATAAGCGGAAATGTACCCCCATCTTCATGTCGAAAGCACGGAGTAACGACGCCATTACACCATGCTTGCAGAGAGGGTAACTTTAATCTCGTGTCTGGTCTGCTTAATGGAGGAAATCAGTCCGATCTCAACACGAAAAACGAGCAGGGGTCGGCACCGCTACATGAGGCTGCAGTTTGTGGTTACGAGGATATCGTGACGCTCTTACTGAAACACGGTGCTGAGACGAAACAACGAGATTGCGAGGGGAATACGCCTCTGCAGGTAGCCTGTGCAGGGGGTTTCGCCTCAGTGTGCTCTTCTCTGATAAGAAAAGGTAAAGCAGACGTACAGGACCGTTCTCCTGTGAATGGTTTTGTGGCACTCCACATAGCAGCCTTAAAAGGTCACACAGAATGTGTAGAGATTCTCTTGGAACATGGAGCTCCATTGCATCCAAGATCAACTGAAGGGGACACACCAAGGGATCTTGCCCTTCATTATGGACACATGCATATAGCTGAGGTAATTGATAATTACCCAGTGCAACCACCAAAGACTTTGCCAAGGATGTGGCTTCACGAAAACTTAGGTAGAAAGGAAGCAGTTGCATTATTTCAGAAGTATGGTTTAGTTGATGGATTGTTCCTTGTGCGTTTGAGCACCAGAGATCGTGGCTATTATGTGCTGTCTGTGGTTGTCAACTGTCAGATTTTTCATTATCAGATACGAAGCAGGTCTGACAGATGGTTTTATATTGATGATGGTCCTCTATTTGAAACCCTACCACATGTTATTGACCACTATAGCAGATGTGCAGATGGCTTACCTGTCCTTCTACAGATGGCTGTCCCCCCTGATGGAAATCCACCAATAACTATACAGAACATACCAGCCCCTCCAGCAAGAAAACGCTCTGCCAAGCCCTTGTTGTCTCCAGCTCATAGTACACCTATGATCAGTGTGTCTCCTGGCAGAAGCTCACCTTTAAGAAATCAGGTCACAAGAGCAGAATCACTTGAAAACCTGGATCATTCAGATAATCCAAGGAGACCAATTCGAGCTTTGAAGAGAGCTAACAGTGAACATGGCTCTCGAGTACAAGCGGTCCATGACATAGAACATTTTAGTAAACTGGAAGACAGACATCCTCTCCCCCCTCCTCCCTCAAACCCACCACCAAGGGCGCAAAGGCGGCCACCACCTCCTCTTCCTCCATCAAGCCCAACAATGCCTGTACCTTCTCCCCAAAAATCAAGCATTCCAACCCTTCCTCATGGGAATCCTAAGCAGTTTGGACAGACACTGATCACAAGAGAGTCTCTTGAGCTTGGACCAGAACTTGGCCAAGGGGAATTTGGCTCTGTACTCAAAGGTATCTGGACTGATCCCAAAGGTGACAAGATTCCAGTGGCAATGAAGACTTTGCATCCTGAAAAAATAGCACATGGAGAACAGGAATTTCTTCGTGAAGCACGGATCATGTCTGGATTGGATCACCCTTGCATTGTAAGGCTCATTGGTGTCTGCCTTGGGCCGCCATTAATTCTGGTTCAAGAATTGGTTCAAATGGGTGCTTTACTAGACTTTTTAATTGATCATCAGTCAGAGATTTCTCAAAAGGACCTCAAATTGTGGGCAGCTCAGATAGCATGGGGGATGATGTACCTCGAGAAGAAACGGTTTGTTCACAGGGACTTAGCAACAAGGAACATCCTGATGTCCACAAAGCAGCAGGTAAAGATAAGTGATTTTGGTTTATCACGAGCAACTGGCTCAGGAAGTGATTACTACAAGGCTTCACAAGGTGGCCGCTGGCCAGTTAAATGGTATGCTCCAGAGTCCATTAATTTTGGAACCTTTTCACATCAAAGTGATGTATGGAGTTATGGCGTGACCTTGTGGGAAATGTACTCATTTGGCCAGTTACCATATGGTGAAATGTCAGGGGGAGAGGTAATACTTTTGCTTGAACAGGAAAACAAACGACTTGAAAGACCTGAAGCCTGCCCAGAACACACTTATTCTCTGATGTTACAATGCTGGGACTTAAAACCAGAAAAGAGACCTACATTTGCTCAACTACACAATATCTTCAGCACAAATCCTTTTTATGCTGATGTGAAACTTCCAATAAAAGCTGCAAGCTAA

Transcript

FUN_041932-T1

ATTCGCACTTGAAGTAATGTAGTCGTGCTTGATAATTTGACAAACGGAAGTTCTCTCGTACGTTATGACTGTATTTGTATGGGATTGGAAGAGTGGCAAAAATGTGTTCTTACTCTGGTGATTGTAACTGGTATCACGGGCGAATTACACGTGAGCAAGCAATCGATCTCTTGCTCCAAAATGGCGGACAGGAGGGTCTATTCCTTGTCAGGGACAGAGCTGGGTCTGACAATTTTGTATTGTCCTTATGGCACGGAAATCAAGCGCTCCATTTTCAAATTCAATGTCGCGGTGGAAAGAATTTTTCAATTGACGATGGTCCGACTTTTGAAGGTTTGGATTCGCTGATTGAGTACTACGTTGACCAGGCTGATGGACTGCCTATCCGACTTGGGCCGTTTATAAGCGGAAATGTACCCCCATCTTCATGTCGAAAGCACGGAGTAACGACGCCATTACACCATGCTTGCAGAGAGGGTAACTTTAATCTCGTGTCTGGTCTGCTTAATGGAGGAAATCAGTCCGATCTCAACACGAAAAACGAGCAGGGGTCGGCACCGCTACATGAGGCTGCAGTTTGTGGTTACGAGGATATCGTGACGCTCTTACTGAAACACGGTGCTGAGACGAAACAACGAGATTGCGAGGGGAATACGCCTCTGCAGGTAGCCTGTGCAGGGGGTTTCGCCTCAGTGTGCTCTTCTCTGATAAGAAAAGGTAAAGCAGACGTACAGGACCGTTCTCCTGTGAATGGTTTTGTGGCACTCCACATAGCAGCCTTAAAAGGTCACACAGAATGTGTAGAGATTCTCTTGGAACATGGAGCTCCATTGCATCCAAGATCAACTGAAGGGGACACACCAAGGGATCTTGCCCTTCATTATGGACACATGCATATAGCTGAGGTAATTGATAATTACCCAGTGCAACCACCAAAGACTTTGCCAAGGATGTGGCTTCACGAAAACTTAGGTAGAAAGGAAGCAGTTGCATTATTTCAGAAGTATGGTTTAGTTGATGGATTGTTCCTTGTGCGTTTGAGCACCAGAGATCGTGGCTATTATGTGCTGTCTGTGGTTGTCAACTGTCAGATTTTTCATTATCAGATACGAAGCAGGTCTGACAGATGGTTTTATATTGATGATGGTCCTCTATTTGAAACCCTACCACATGTTATTGACCACTATAGCAGATGTGCAGATGGCTTACCTGTCCTTCTACAGATGGCTGTCCCCCCTGATGGAAATCCACCAATAACTATACAGAACATACCAGCCCCTCCAGCAAGAAAACGCTCTGCCAAGCCCTTGTTGTCTCCAGCTCATAGTACACCTATGATCAGTGTGTCTCCTGGCAGAAGCTCACCTTTAAGAAATCAGGTCACAAGAGCAGAATCACTTGAAAACCTGGATCATTCAGATAATCCAAGGAGACCAATTCGAGCTTTGAAGAGAGCTAACAGTGAACATGGCTCTCGAGTACAAGCGGTCCATGACATAGAACATTTTAGTAAACTGGAAGACAGACATCCTCTCCCCCCTCCTCCCTCAAACCCACCACCAAGGGCGCAAAGGCGGCCACCACCTCCTCTTCCTCCATCAAGCCCAACAATGCCTGTACCTTCTCCCCAAAAATCAAGCATTCCAACCCTTCCTCATGGGAATCCTAAGCAGTTTGGACAGACACTGATCACAAGAGAGTCTCTTGAGCTTGGACCAGAACTTGGCCAAGGGGAATTTGGCTCTGTACTCAAAGGTATCTGGACTGATCCCAAAGGTGACAAGATTCCAGTGGCAATGAAGACTTTGCATCCTGAAAAAATAGCACATGGAGAACAGGAATTTCTTCGTGAAGCACGGATCATGTCTGGATTGGATCACCCTTGCATTGTAAGGCTCATTGGTGTCTGCCTTGGGCCGCCATTAATTCTGGTTCAAGAATTGGTTCAAATGGGTGCTTTACTAGACTTTTTAATTGATCATCAGTCAGAGATTTCTCAAAAGGACCTCAAATTGTGGGCAGCTCAGATAGCATGGGGGATGATGTACCTCGAGAAGAAACGGTTTGTTCACAGGGACTTAGCAACAAGGAACATCCTGATGTCCACAAAGCAGCAGGTAAAGATAAGTGATTTTGGTTTATCACGAGCAACTGGCTCAGGAAGTGATTACTACAAGGCTTCACAAGGTGGCCGCTGGCCAGTTAAATGGTATGCTCCAGAGTCCATTAATTTTGGAACCTTTTCACATCAAAGTGATGTATGGAGTTATGGCGTGACCTTGTGGGAAATGTACTCATTTGGCCAGTTACCATATGGTGAAATGTCAGGGGGAGAGGTAATACTTTTGCTTGAACAGGAAAACAAACGACTTGAAAGACCTGAAGCCTGCCCAGAACACACTTATTCTCTGATGTTACAATGCTGGGACTTAAAACCAGAAAAGAGACCTACATTTGCTCAACTACACAATATCTTCAGCACAAATCCTTTTTATGCTGATGTGAAACTTCCAATAAAAGCTGCAAGCTAACAGACTCCAGTTAAAAATAATTAGGTATTTTATAAAATGGTAATTGACACCTGACACTTCCAATCATTCCTTTTTCAGACTACTCTTCTGATTTAAATTTGAAGAAAAGTTATTTCGTATTTCATAGTTGTCTCCGTTCACATGTTAATAAATCTTTGCATTTTCTTCACTGGTTAATAGGTTATTGTCAAAAATATTTTCTTGGTTATCTTGTGCTTGTAGCTGAATCTGAAAGGGTCAAGGGCAACTTAGAGATCCAAACATCGCATTTTATTTTCAATCATTTGTGTGTCACTGTGGTAGCCATGGTCTGCATTATTTTAAAGATAATACAGAAAACTTGCCACTATTAAACTATGACTCATTTTCCTGTAGTCTCTAAAGGAAGAACTTAGGTGTTTTTTTTAAATAACCATAGCAATAATTATTATTATTATTGGTTACCCCAAAATAACCAAATATTGAAAAGGCCATATTTTTTGCTTTAAAGTAAACTTGTCGGTGAAACTCTGTTAATATAGTGCATAGACAGCTTTAATTTGTTATTCTTAAATACTACTGCTTTTTTGTTGTTCTCCCTAGAATAATTTTTTTTGGTGGACAGGGGGTGTGTCAGATTAGTAGAAAGTAAAAGTAAGGGGTGGATCCAGCATTTTTTGAAAGTGGGGACCATACAAGAATACTAATCAGCGTGCCTCAGTGGCACTACTTTCTAGGGGGGTCTGGGGGCATGCCCCCCCCCCCCCCCAGAAAATTTTGAAAATTTGGGTACTCTTACATGCACTCTGGTGCAATCTGGAACGTAAAATATCAGGATTTCATATTGAATCAAGTTATAAGTTGGGGTTATAATGAGACAGTTTTTCAGCGAGTGCTTAAGATTTTACGTTGTTACAGTCTCTGTAAGATAGGTTGACTGTAGGCAAGTAATTTGCATCCAGTCTTCTTCCTTATTTCAAAAGGATAATATTAACGCCTGTAAGTTGAAAGCTTATTAACTTTGGTCATACTATTAGCGAAAAATCATGCTTTAGCTAAAGAAATCAAAAGTTCCAACAGCCTGCTTACAAAATGATTAAATTATTGTATAGTTTGACATAAAAAACGAACTGAAAAGGGTGGCTGCAGACGCCTTGGCCCCCCCTACACCCCCCCTGAAAGTAGTGGTAAGGCTTTGTCTGGTTGTTTAAGGATGTTGGACACAGATGTTATTGTGAAAATAATAAAATTAATAAAAAGG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P53356	Tyrosine-protein kinase HTK16 OS=Hydra vulgaris OX=6087 GN=HTK16 PE=2 SV=1
Q24145	Tyrosine-protein kinase Shark OS=Drosophila melanogaster OX=7227 GN=Shark PE=1 SV=2
P43403	Tyrosine-protein kinase ZAP-70 OS=Homo sapiens OX=9606 GN=ZAP70 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005640 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00017 all species →	SH2	SH2 domain	Domain	Interproscan
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF07714 all species →	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF13857 all species →	Ank_5	Ankyrin repeats (many copies)	Repeat	Interproscan
PF00023 all species →	Ank	Ankyrin repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR008266 all species →	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR001245 all species →	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR036860 all species →	Homologous_superfamily	SH2 domain superfamily	Interproscan
IPR000980 all species →	Domain	SH2 domain	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR050198 all species →	Family	Non-receptor tyrosine kinases involved in cell signaling	Interproscan
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR020635 all species →	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24418 all species →	TYROSINE-PROTEIN KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004713 all species →	Molecular Function	protein tyrosine kinase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17512	SHARK; tyrosine-protein kinase shark	EC:2.7.10.2	Protein kinases	ko01001	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.