Gene detail

Detailed information of FUN_041986-T1 in Siderastrea siderea

Genomic Location: contig_53:4707624...4740562
NR annotation: no NCBI-NR hit recorded
Species abbreviation SSIDE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_041986-T1

ATGGACGAAGACGAAATGAGGGCAGACGAACTAGACGTCTTTTACCATCAAGTAAAGAAACAGATTCTTCAGTATCAAAGTGGAAGCATTGGTTTGTTTCCCCTGCACACATCTGGTAAGAATGAAGAGAGTCATGTACGAGACAATGTTTACTGTGCCATGGCTGTCTGGGCCCTGGGATTGGCTTACAGACACATGGATGACAGCAAAGGTAGAGCTTACGAACTTCAACAGGCTGCCGTAAAATGTATGAGGGGAATCTTGTTCTGTTACATGAGGCAAGCAGACAAGGTGGAGCAGTTTAAGAAGAATCAGTTAGGTCATCATTCACTGCACGTCAAGTTTAACGTCAACACTGGAGATACAGTGGCTTCAGACTCAGACTGGGCTCATCTGCAGATTGATGCAGTATCACTGTATCTCCTCACACTTGTCCAAATGACTGCATCAGGGCTGCAGATTATTTATACCAGTGATGAGGTAAACTTTGTACAAAATCTGGTGTACTACATTGAGCGTGCCTACAGAACTCCTGATTATGGCATGTGGGAAAGAGGAAGCAAGGAAAACGTTGGACACAAGGAACTAAATGCTAGTTCTATTGGAATGGCAAAGGCTGCCCTTGAGGCTATCAATGGATTTAATGTTTATGGGATGCAGGGAACCTCATCATCCGTGATCTATGTTGATCCAGATGCACACAACAGAAACTACACCATCATGCATTCTATGCTGCCTATTGCATCCTCATCAAAGGAGACTGATGCTTCGCTGTTAACGATCACTGGATTTCCGGCATTTGCTGTTGGTGATGAATCATTGTGTCAGCAAACAAAAGACATGGTGTTAGAAAAACTAGAGgGAACGTATGGATTAAAACGGTTCTTGCGTGATGGCTACAAGACTGTCCTTGAGGACAAAAATCGCAGATTTTATGAGAAGAGAGAACTTCAGGTGTTTGATGGAATTGAATGCGAGTGGCCATTTCTCTTCATCTATCTGGCGCTAGACGcgCTCTTTAAAAATGATAAAGAAACTGCTCAACATTACGTCAAGAAACTTCATGACGAGCTGTTACAGCACACGGACTCTGGTGATCTGATTCCGCACTATTACTATGTACCCAAAATATATATGGAAGCTGAACGCAAGCAGCCGCATTCACAGATAAGACTACCAAGCGATGAGGATGGCGACCTTTTCATGTGGGGACAGGCTCTACTCATCATCATGCAGTTAACAGaTTGCGGTCTTTTAGACGTGAATGAAATTGACCCCATTGGAAGGCACTTGTCCCAGTCGGCTAAAAATCGCTATGGTTACAGTAGCCACAGATATTCTTCATTTAAGGTTGTTGACTCCGACTTGGTTGTTCAAGTGTCTTTGATCTCAGAGAGCAGAAATTTACAGACTACGTTAGCAACGTTTGGTATTGAGACTCAAACTCCACAACAGATTGAGCCCATACAAATCTGGCCACCATCCGAGCTTGTCAAGGTTTACAAGCGCCTTGGAGTCAATCGCAAGCTAGGATTGTCCGGGCGTCCACCGAGGCCAATTGGAGGCCTGGGAACCAGTAAGATCTATCGTATCTTGGGAAGAACAGTTGTAACTTATCCTAAACTTCTTGATGAGACGGATTTTTATATGGCACTGGACACGTCCTTGCTTATCGACGACATAAAGACACACTTGGCGTTCACGCGCAGCAACTGGAACATGAAGGGGCGTCCCACGCTGTGCCTCTTGCTCAGAGAGAAAAACTTGCGGGGCAAGCAATTTCACGAGGCTCTTGAGCTGTTGGCTTCATTCAAGCGAGGCCTTTGTGGAGGTGTGAAAATTAAACTTGGAAGACTTCAGACTTTGGTATCAACAGCAGTTATAGATCACCTGGATTTCGTTCAAGCAGACCGTGACATCAGAGACCCTGATGATGAAACCGAAGGAGGACTGGACCAAGCACGTGTCAGGGAAAAGGAAGGAGCCGATTCCAATCCCCCGACACCTGGCTCGTCCGAGGGTCACAGGATGAGTCGGACCCTGAGATTTAGTCGCTCCATGACAGTGAGCGAACAGGATGATGAGCAGCCTAATGATGAGGAGGACGCTAATCCCAGAGACCTGGTAACTAAATCACGTGAGGCACTTTTGGCGGAACTTGACAACAAGCCAAACGTGGATCGACAAATGCTGATTTTACAGGAGCTACTGAAGCGAGAGGGTGAATACTTCCAGACGCCAGAGGGATCAGTCATCGATGTGATCAACCATCTTTACCAACAGGCTGCATATGACAGAAAATGGTCAGCGGTTCGCCGCGGAGCCGGCCTTCTCAAAAAACTGGTGGACAGTCTTGCGCCCGGGATCACTACTATACTGGTCAGCGGTAAAGTGGTGACAATTGGAGTTTTTGGTCATGAAGAGAAAGTGATTTACGAGCCTTTAACACCTGCAGCTATCCAGAAAATCCTTTACTCCTTCTGCAGTCCTCATGACGTCAGAGAGGCAGTCCTCCAACAAGAGATGGTTCTTTACCTGGCTTCTTTTGTCGCAATAATGCCAAAAGTCTTTGAAGGAATGTTAAAGATAAGAATTGGATGGATTATTGAAGCTATGAAACAGAGACTAGCTAGCCGAAAACTTGGGTCTTTGTATGCCCAATCTCCCAGTGACGTCAAGGCACTGCTGAAGATTGTTCTCACTTCGAAAGGGAAACACCACGGACAAGACATCGCTCCAAGGACCCCACTACAAAACAGACAGTTGGACGGAGCAGTACATAGAGTACCTCCTGGCTTTTATGACAAAGTGTGGAGTATATTGTCCCGTGCACCTGACGGAATCAAAGTGTCAAAACACAATGTCTTGTCACAGCTTCCTACCATATCAGAAATGACGCTTCGTGAACGGAACTTTCAGTTGAAAGTGGAAGAGCTGTTGAGCGACATTTCCAATCCTGAATACAGACAGATAGTAGTGGAGCTCTTGGTCGTCCTTGCAACAATTCTTGAAAGAAACCCGGAAGTGGAATTGAGCCAGTGTATCGACTTAGACGAGCTTGTTGACGAGGCCCTTGAACTTTTTGGTTACGACTTGGCGCCAGAAAATGGTCAGAGTGTAAGAGACCAGTTTTACAACACACCGCGTGACGGGAAGGGCGGAACCACTACTTACTTGGCGAGAGCCGTGGTTAACAGACTTCTGAGAGGAAGCGCATGCGTATCATCCAACTGTTACGTCAGCTGA

Transcript

FUN_041986-T1

AGTACCCATAACACCACGCGCGCAGtgcaaacaaacatggcgcccTTTCTTTGCGGAACAACTCTTGTGAAGAAGTGTTATAAAATCTAACAGAGGAAATGGACGAAGACGAAATGAGGGCAGACGAACTAGACGTCTTTTACCATCAAGTAAAGAAACAGATTCTTCAGTATCAAAGTGGAAGCATTGGTTTGTTTCCCCTGCACACATCTGGTAAGAATGAAGAGAGTCATGTACGAGACAATGTTTACTGTGCCATGGCTGTCTGGGCCCTGGGATTGGCTTACAGACACATGGATGACAGCAAAGGTAGAGCTTACGAACTTCAACAGGCTGCCGTAAAATGTATGAGGGGAATCTTGTTCTGTTACATGAGGCAAGCAGACAAGGTGGAGCAGTTTAAGAAGAATCAGTTAGGTCATCATTCACTGCACGTCAAGTTTAACGTCAACACTGGAGATACAGTGGCTTCAGACTCAGACTGGGCTCATCTGCAGATTGATGCAGTATCACTGTATCTCCTCACACTTGTCCAAATGACTGCATCAGGGCTGCAGATTATTTATACCAGTGATGAGGTAAACTTTGTACAAAATCTGGTGTACTACATTGAGCGTGCCTACAGAACTCCTGATTATGGCATGTGGGAAAGAGGAAGCAAGGAAAACGTTGGACACAAGGAACTAAATGCTAGTTCTATTGGAATGGCAAAGGCTGCCCTTGAGGCTATCAATGGATTTAATGTTTATGGGATGCAGGGAACCTCATCATCCGTGATCTATGTTGATCCAGATGCACACAACAGAAACTACACCATCATGCATTCTATGCTGCCTATTGCATCCTCATCAAAGGAGACTGATGCTTCGCTGTTAACGATCACTGGATTTCCGGCATTTGCTGTTGGTGATGAATCATTGTGTCAGCAAACAAAAGACATGGTGTTAGAAAAACTAGAGgGAACGTATGGATTAAAACGGTTCTTGCGTGATGGCTACAAGACTGTCCTTGAGGACAAAAATCGCAGATTTTATGAGAAGAGAGAACTTCAGGTGTTTGATGGAATTGAATGCGAGTGGCCATTTCTCTTCATCTATCTGGCGCTAGACGcgCTCTTTAAAAATGATAAAGAAACTGCTCAACATTACGTCAAGAAACTTCATGACGAGCTGTTACAGCACACGGACTCTGGTGATCTGATTCCGCACTATTACTATGTACCCAAAATATATATGGAAGCTGAACGCAAGCAGCCGCATTCACAGATAAGACTACCAAGCGATGAGGATGGCGACCTTTTCATGTGGGGACAGGCTCTACTCATCATCATGCAGTTAACAGaTTGCGGTCTTTTAGACGTGAATGAAATTGACCCCATTGGAAGGCACTTGTCCCAGTCGGCTAAAAATCGCTATGGTTACAGTAGCCACAGATATTCTTCATTTAAGGTTGTTGACTCCGACTTGGTTGTTCAAGTGTCTTTGATCTCAGAGAGCAGAAATTTACAGACTACGTTAGCAACGTTTGGTATTGAGACTCAAACTCCACAACAGATTGAGCCCATACAAATCTGGCCACCATCCGAGCTTGTCAAGGTTTACAAGCGCCTTGGAGTCAATCGCAAGCTAGGATTGTCCGGGCGTCCACCGAGGCCAATTGGAGGCCTGGGAACCAGTAAGATCTATCGTATCTTGGGAAGAACAGTTGTAACTTATCCTAAACTTCTTGATGAGACGGATTTTTATATGGCACTGGACACGTCCTTGCTTATCGACGACATAAAGACACACTTGGCGTTCACGCGCAGCAACTGGAACATGAAGGGGCGTCCCACGCTGTGCCTCTTGCTCAGAGAGAAAAACTTGCGGGGCAAGCAATTTCACGAGGCTCTTGAGCTGTTGGCTTCATTCAAGCGAGGCCTTTGTGGAGGTGTGAAAATTAAACTTGGAAGACTTCAGACTTTGGTATCAACAGCAGTTATAGATCACCTGGATTTCGTTCAAGCAGACCGTGACATCAGAGACCCTGATGATGAAACCGAAGGAGGACTGGACCAAGCACGTGTCAGGGAAAAGGAAGGAGCCGATTCCAATCCCCCGACACCTGGCTCGTCCGAGGGTCACAGGATGAGTCGGACCCTGAGATTTAGTCGCTCCATGACAGTGAGCGAACAGGATGATGAGCAGCCTAATGATGAGGAGGACGCTAATCCCAGAGACCTGGTAACTAAATCACGTGAGGCACTTTTGGCGGAACTTGACAACAAGCCAAACGTGGATCGACAAATGCTGATTTTACAGGAGCTACTGAAGCGAGAGGGTGAATACTTCCAGACGCCAGAGGGATCAGTCATCGATGTGATCAACCATCTTTACCAACAGGCTGCATATGACAGAAAATGGTCAGCGGTTCGCCGCGGAGCCGGCCTTCTCAAAAAACTGGTGGACAGTCTTGCGCCCGGGATCACTACTATACTGGTCAGCGGTAAAGTGGTGACAATTGGAGTTTTTGGTCATGAAGAGAAAGTGATTTACGAGCCTTTAACACCTGCAGCTATCCAGAAAATCCTTTACTCCTTCTGCAGTCCTCATGACGTCAGAGAGGCAGTCCTCCAACAAGAGATGGTTCTTTACCTGGCTTCTTTTGTCGCAATAATGCCAAAAGTCTTTGAAGGAATGTTAAAGATAAGAATTGGATGGATTATTGAAGCTATGAAACAGAGACTAGCTAGCCGAAAACTTGGGTCTTTGTATGCCCAATCTCCCAGTGACGTCAAGGCACTGCTGAAGATTGTTCTCACTTCGAAAGGGAAACACCACGGACAAGACATCGCTCCAAGGACCCCACTACAAAACAGACAGTTGGACGGAGCAGTACATAGAGTACCTCCTGGCTTTTATGACAAAGTGTGGAGTATATTGTCCCGTGCACCTGACGGAATCAAAGTGTCAAAACACAATGTCTTGTCACAGCTTCCTACCATATCAGAAATGACGCTTCGTGAACGGAACTTTCAGTTGAAAGTGGAAGAGCTGTTGAGCGACATTTCCAATCCTGAATACAGACAGATAGTAGTGGAGCTCTTGGTCGTCCTTGCAACAATTCTTGAAAGAAACCCGGAAGTGGAATTGAGCCAGTGTATCGACTTAGACGAGCTTGTTGACGAGGCCCTTGAACTTTTTGGTTACGACTTGGCGCCAGAAAATGGTCAGAGTGTAAGAGACCAGTTTTACAACACACCGCGTGACGGGAAGGGCGGAACCACTACTTACTTGGCGAGAGCCGTGGTTAACAGACTTCTGAGAGGAAGCGCATGCGTATCATCCAACTGTTACGTCAGCTGAGAAGCTGCAGCACATCCGTACCATCCAACTTTAACGCCACTTAAGGACCTATCGCTCAATATCCGTGGATTTGCATTTATGCATGTGTGCTTAGTATTGACGAATTTGGCGATGTTCAGCTGCGCTTTGCGTCCATCGGTCTCGGTGCCCCCGGTTTAGTTTTCAAAAAAGATTTCGTTTTGTA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00723 all species →	Glyco_hydro_15	Glycosyl hydrolases family 15	Repeat	Interproscan
PF19292 all species →	KPBB_C	Phosphorylase b kinase C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008734 all species →	Family	Phosphorylase kinase alpha/beta subunit	Interproscan
IPR011613 all species →	Domain	GH15-like domain	Interproscan
IPR008928 all species →	Homologous_superfamily	Six-hairpin glycosidase superfamily	Interproscan
IPR012341 all species →	Homologous_superfamily	Six-hairpin glycosidase-like superfamily	Interproscan
IPR045583 all species →	Domain	Phosphorylase b kinase regulatory subunit alpha/beta, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10749 all species →	PHOSPHORYLASE B KINASE REGULATORY SUBUNIT	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005516 all species →	Molecular Function	calmodulin binding	Interproscan
GO:0005964 all species →	Cellular Component	phosphorylase kinase complex	Interproscan
GO:0005977 all species →	Biological Process	glycogen metabolic process	Interproscan
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K07190	PHKA_B; phosphorylase kinase alpha/beta subunit	-	Glucagon signaling pathway	ko04922	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.