Detailed information of FUN_042001-T1 in Acropora pulchra

Genomic Location: ptg000035l:9726892...9729183
NR annotation: XP_015756672.1, PREDICTED: spliceosome-associated protein CWC15 homolog [Acropora digitifera]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6NUB2Protein CWC15 homolog A OS=Xenopus laevis OX=8355 GN=cwc15-a PE=2 SV=1
Q9P013Spliceosome-associated protein CWC15 homolog OS=Homo sapiens OX=9606 GN=CWC15 PE=1 SV=2
Q5RE65Spliceosome-associated protein CWC15 homolog OS=Pongo abelii OX=9601 GN=CWC15 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008658 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04889
all species →		Cwf_Cwc_15Cwf15/Cwc15 cell cycle control proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006973
all species →		FamilyPre-mRNA-splicing factor Cwf15/Cwc15Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12718
all species →		CELL CYCLE CONTROL PROTEIN CWF15Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000398
all species →		Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0005681
all species →		Cellular Componentspliceosomal complexInterproscan
GO:0045292
all species →		Biological ProcessmRNA cis splicing, via spliceosomeInterproscan
GO:0071013
all species →		Cellular Componentcatalytic step 2 spliceosomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K12863CWC15; protein CWC15-Spliceosomeko03041deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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