Gene detail

Detailed information of FUN_042053-T1 in Acropora pulchra

Genomic Location: ptg000035l:10102907...10115797
NR annotation: XP_029185300.1, argininosuccinate lyase-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P51464	Argininosuccinate lyase OS=Aquarana catesbeiana OX=8400 GN=ASL PE=3 SV=1
P20673	Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1
Q91YI0	Argininosuccinate lyase OS=Mus musculus OX=10090 GN=Asl PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002688 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00206 all species →	Lyase_1	Lyase	Domain	Interproscan
PF14698 all species →	ASL_C2	Argininosuccinate lyase C-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020557 all species →	Conserved_site	Fumarate lyase, conserved site	Interproscan
IPR008948 all species →	Homologous_superfamily	L-Aspartase-like	Interproscan
IPR009049 all species →	Family	Argininosuccinate lyase	Interproscan
IPR024083 all species →	Homologous_superfamily	Fumarase/histidase, N-terminal	Interproscan
IPR022761 all species →	Domain	Fumarate lyase, N-terminal	Interproscan
IPR000362 all species →	Family	Fumarate lyase family	Interproscan
IPR029419 all species →	Domain	Argininosuccinate lyase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43814 all species →	ARGININOSUCCINATE LYASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0004056 all species →	Molecular Function	argininosuccinate lyase activity	Interproscan
GO:0042450 all species →	Biological Process	arginine biosynthetic process via ornithine	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01755	argH, ASL; argininosuccinate lyase	EC:4.3.2.1	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.