Gene detail

Detailed information of FUN_042119-T1 in Siderastrea siderea

Genomic Location: contig_54:589254...636142
NR annotation: no NCBI-NR hit recorded
Species Siderastrea siderea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_042119-T1

ATGCTACGAATCAAGTTTAACGTCAGATCGACGGCGGAGAGACCCGACAAGTCACAAGGACAGACAGAGggccATGCCAGGGGAAACCGAAAAGCTTTGGTTGTGCGTTCTGCTATTCAGACTGTCCTTAGAAAATTTGGACGGGTCGCTCAACGACATTGCGGGAAGGTCATAATGTTTGGTTTTATTCCCTTGCTTATTTGTGCGTTTGGGTTGACGAGAGCTAAACTGGAAACAAATGCGGAGAATCTATGGATAGAAGTTGGTGGACGACTGGAAAAGGAACTCTCCTATACCAAGAAAGCTCTTGGAGAGGGTTATGGTGGGACAAACGAGCTTCTCATACAAACGCCTAACACAGAAGGAACAAATATTCTTTCTGTAGAAGCAATGAAGCAGCACTTGGAGGCTGTGCTGGTTGCCACAAGTGTTTCCGTGGAATTGTTTGACCAAGCATGGACACTGAAGGACATATGCCATACCTTGAGTCTTCCTCCTTTGGATGATAATATTTTCGATACCATCCTCAACCAGCTTATGCCATGCCTTATCATAACACCCTTGGATTGTTTCTGGGAAGGTGCCAAACCGCTTGGGCCAAGAACTAAAGTCAGCTTAATGGATGATGAAGATACTTCTCTTGGTAGCTTAAAATGGACAAGCCTTAATCCCTTGGAGATGATCAATTATTTCAAGCAGCTTTTTGATAATTCTTTTAAAAAGCGGGCATTTGAGAAAATGGTGGGGCTAGTCAAAGAGgcTGGAATCACCAGTGGTTATGTGGAGAAGCCTTGTCTGGATCCATATGATCCTGAATGTCCCCAAACAGCACCAAATTATAAAACCAAGAAGAAACCAGACATAGGTGTTGAGTTGACTGGTGGCTGCCAAGGATTTGCCACAAAGTTCCTGGACTGGCCTGAGGAGCTTATTGTAGGAGGAGCTGTTAAGAATAGGAGTGGAGTTATAAGGAGTGCTAAGGCATATCAAAGCATCATCATGTTGATGGGAAAGCAGCAGCTGTTTTCCTTTTGGCAAACACGGGCAAAAGTCAACCATTTGGAGTGGACAGAAGATGCAGCATCGCAAGTTCTGGAGGCATGGAAGAGGAATTTTACAAAGACAATCAACTCTTTGGTTCAAAACAAGGAAGATTCATCAGTGCTGGCTTTCTCCTCCACCTCATTTAATGATCTGTTGAAAGACTTCTCTCAGACAAGCTACAAGAAAGTGGTTATTGGATACGTCCTCATGCTCATCTATGCTTTCATAACCCTCAAAAACTGGTGCCATTGGGTGGACTCTCATGGTGCTTTGGGGGTTGCTGGTGTTCTTCTGGTCACTGTGGCCGTTACTTCAGGCCTGGGATTTTGCTCCTTCATCGGGATAAAATTCAATGCAGCTTCTACGCAGGTCTTGCCATTTCTTGCACTTGGTTTGGGCGTGGATGACATGTTTCTGCTTGCTCACACTTATTCCTCTTCAAAAGACAAAACCAATGAACCAGCAGCATACTGTCTTGGCACCACTGGAGTCAGTGTGTTTTTGACATCTTTCAACAACATGTTTGCATTCTTCATGGCAGCATTAATACCCATCCCAGCTCTGAGGTCTTTTTCATTACAGGCTGCTATTGTCGTTGTGTTCAACTTTTTTGCCGTCATCTTGATCTTTCCTGCGATGATTGTTATAGACAAGAACAGAAGGAGCAGTGGCTATTTTGACCTGTTTTGCTTTTGTAGAAGGACTGAGCCACAAAGAATTTCAATAACTCCAAGCACGTCAGCAGACAGTAGTCTGGTCCTCCACCGTTACCACAACTCGTGTAACTCATTGTCAGATGCCTCGGCCGTTTTACAGGGTCTCAGTAGTACTGTCATACTTCCTGGTACTGTCCAGGCAACAGCGTCCCAAACAATACACTTACCAAGTGTTGTGACAGTCCAAGCCTCTGCGTTAGCGGAGCTGGGCAGTCCCCCGATGACACAGCGTCAGCACCAGAGACGGCTAGGTAGGAGAGGCAGACAGATGTCGGAATCAGACGACATTGAACTGTCAGCCATGGGAAACATCCGCAGCAGTAATGGGACTGGGACCTCTATTGCCAGAGCTGGGGCCTCGGCAAATCTTGTGCTGGCTTCTGAACAAAGAAATAGCAGAGACTCAAACATGAGACCTACATGTCAAGGCTACAACAGAGCATTAAAGGTTCACCCTGAAAAAAGTGCAAGTGATAGTTGTACATGCTCAGAAATCATGCCTGAGCATAGAAGCAAGAATCTTGCTCCCAAGAGTTTTTCAAGGGATAGTGTCATCAATGAAAATGCCAGATATCCTACTAAGAGTTATTCCCGGGACAGCATTATCAACGAAAATGCTGTTCTCTTCACCAGTAGAGGTGAGAGTAAAGCACGGACACAGACACAGAGTAGTGCGCCACGAAATGTGCAGATTCAGGTGTCAGCAAATGCTGCTTCTAATGGAGATACAGCTGTGGCAATGGCCGAGTGTTCTTCCATTAGGGACTCACCGAGATCATCATGTTCGCACTCTAGGTCTTCACCTGACATTGAGTCAATGGGAAGGGCCTCTACGTCGCAAAGTTTGCGGGACCCAGGTGCTGAGTCAAGCAGTAGGTGGAGTGTATTCAAGGAGAAGCTAAGTGTTCTCTCACTGTCCTACTTTGCAAGAGAATACTATGGTCCATGGTTGCAGCGAATGCCAATGAAGATCTCTGTCCTGTTTCTGTTTGCCTGTCTCTTTGCTGCTGGCGTATATGGCTGTATGAAAGTGGAGGAAGGATTGGACCTAACAGATGTAGTACCAAGAGGAAGCCCAGAGCACAAGTTTGTTGAGGCCCAGTTTGAGTATTTCTCATTTTACCAGATGGCTGCTGTCACCAAAGGAGGCTACGATTATGCTAATGGTCAGGAACTCTTGTACAAGTTCCATGAAGCTTTTAGGAAGATTCCAAACATAATTAAAACACCCGAGGATGATCTGCCACGTTTCTGGTTGATGTACTTTAGAGAATGGCTTGAAGGTCTGCAAGATGCATTTGACAAAGACTGGGAGAAAGGAGATATAACATATGAAGGATGGACAAAGAATGCATCTGATGATGGTGTGATAGCATACAAGCTGTTAGCTCAGACTGGggaaaaagaacagatcaacaGATCTATAGTACGTAGCGTGAGGTTGGTAAACAAGGAAGGGATAATTCGTCCAGAGACCTTCTACAAGTACCTGTTTGTCTGGTACAATATGGACTACTTGGGGACTACCATGTCACAGGCAAACATCAAGCCTGAGCCTGAGGAGGGTTGGTCTAACAAGAGAAGCAGTCAAGACTACAATGCCATGCGTGTTGAGCCTCCTCATCCTCCGATAAACTTTTCTTACATTCCCTTCAATCTGATCAACCTCAAGTACACAAAGGATTTCATCGAAACAATCAAGAGTGTCCGTGCCATATCTGAGGAGTTTTCGGCACTTGGCTTGCCCAATTATCCCACTGGTATCCCATTTATTTTCTGGGAGCAGTACATTTGGCTTGGAGAGCACCTTCTCACTGCTGTTGCCATCGTGCTAGCAGCAAGTTTCCTGGTCATGGCTGTCATCTTGTGCAATTTCTGGGCAGCAATGTTCATAgTGATAGTACTTGTGATGATCACAGTGGAGGTGTATGGCTTCATGGGATTGGCTGGTATTAAACTCAGTGCTGTCCCAGCAGTCACACTCATTCTTTCTGTTGGAGTTGGTGTGGAGTTTACTGTTCACATGTGTATGCAATTCTTGACCTGCAGGGGCGACAGAAACCAGCGCATGCAAAGAGCAGTTGAACACGTGTTTTCTCCAGTTGTGGACGGCGCTGTCTCGACATTACTTGGCGTTATCATGCTTGCAGGATCAGACTTTGATTTTATCGTCAGGTACTTCTTTCATCTACTGGCTGCGTTGATTGGCATTGGTACTTTGAATGGCCTGGTGTTTTTACCAGTTTTGTTATCTCTTGTAGGGCCCGGGCCTGAGTTGGAAGAAATTACGCCACCGGGAACAGCTTCGTCAACCGGATCAAACAGGGAGTTTCTACCAAGCTCCACGTGCAGGCAGAGAACCCCTCCAACCGACTCTGAGTTGTGTATTGTAACTAAACAAGAAGAACTTTCTTCGGCCTCCGGGGGGAGGCGTCCCCGTCGCAAGAGGGGTCCCCACAAAAGCAACAGTCGTGGAAACAAGCGCGCAAATCAAAACAGAAGTACACCTCCGGTGGATTCCGACTCGTCCAGTTCGACCGTTACTCGGGTGACCGCTCGAGCTACGGTCACAGTGGAAGTTCACACCGAACACACCTCGGAAAGGTCATCGTATCCGAACCATCGCACCGGAGCTCAAGTCGGAGGGCCCTTTCACAACGAGGGGGAAATAGGCGAGGAAGATTTGCATATTACGAACTTAGAAGAGTATGATGGTGATGTAAAGAGATAG

Transcript

FUN_042119-T1

cacaaaacaaaaacattgtcGTTATCGAATCGTCGCGAATCTTGTAGGTATAAGGATTACAATGTTATCTTCTATAatatctttttctttcaaaaacaaaGGAGCCAAACATCTTAATTGCAGCTTCCAGGTCGAAAGATGCCAAGGCTATTTTTTTCACAATGTCCTTGAACCGTGACCCTTGAAGAAATCTCCCTCACTTGCGGATTGACATAAGCAATAAATAGAACCTCAAAGAACGCGGTTTTAAACTTGATATCATCGATTAGTCGGCGAGAAAACAGTTCGTTCCTAATTTCATTCGCACCCAATAATTTGTCACGACACACTCGCTCCATACGTGGTGCAATTCTCGCAGCTTTCTTCATGCTACGAATCAAGTTTAACGTCAGATCGACGGCGGAGAGACCCGACAAGTCACAAGGACAGACAGAGggccATGCCAGGGGAAACCGAAAAGCTTTGGTTGTGCGTTCTGCTATTCAGACTGTCCTTAGAAAATTTGGACGGGTCGCTCAACGACATTGCGGGAAGGTCATAATGTTTGGTTTTATTCCCTTGCTTATTTGTGCGTTTGGGTTGACGAGAGCTAAACTGGAAACAAATGCGGAGAATCTATGGATAGAAGTTGGTGGACGACTGGAAAAGGAACTCTCCTATACCAAGAAAGCTCTTGGAGAGGGTTATGGTGGGACAAACGAGCTTCTCATACAAACGCCTAACACAGAAGGAACAAATATTCTTTCTGTAGAAGCAATGAAGCAGCACTTGGAGGCTGTGCTGGTTGCCACAAGTGTTTCCGTGGAATTGTTTGACCAAGCATGGACACTGAAGGACATATGCCATACCTTGAGTCTTCCTCCTTTGGATGATAATATTTTCGATACCATCCTCAACCAGCTTATGCCATGCCTTATCATAACACCCTTGGATTGTTTCTGGGAAGGTGCCAAACCGCTTGGGCCAAGAACTAAAGTCAGCTTAATGGATGATGAAGATACTTCTCTTGGTAGCTTAAAATGGACAAGCCTTAATCCCTTGGAGATGATCAATTATTTCAAGCAGCTTTTTGATAATTCTTTTAAAAAGCGGGCATTTGAGAAAATGGTGGGGCTAGTCAAAGAGgcTGGAATCACCAGTGGTTATGTGGAGAAGCCTTGTCTGGATCCATATGATCCTGAATGTCCCCAAACAGCACCAAATTATAAAACCAAGAAGAAACCAGACATAGGTGTTGAGTTGACTGGTGGCTGCCAAGGATTTGCCACAAAGTTCCTGGACTGGCCTGAGGAGCTTATTGTAGGAGGAGCTGTTAAGAATAGGAGTGGAGTTATAAGGAGTGCTAAGGCATATCAAAGCATCATCATGTTGATGGGAAAGCAGCAGCTGTTTTCCTTTTGGCAAACACGGGCAAAAGTCAACCATTTGGAGTGGACAGAAGATGCAGCATCGCAAGTTCTGGAGGCATGGAAGAGGAATTTTACAAAGACAATCAACTCTTTGGTTCAAAACAAGGAAGATTCATCAGTGCTGGCTTTCTCCTCCACCTCATTTAATGATCTGTTGAAAGACTTCTCTCAGACAAGCTACAAGAAAGTGGTTATTGGATACGTCCTCATGCTCATCTATGCTTTCATAACCCTCAAAAACTGGTGCCATTGGGTGGACTCTCATGGTGCTTTGGGGGTTGCTGGTGTTCTTCTGGTCACTGTGGCCGTTACTTCAGGCCTGGGATTTTGCTCCTTCATCGGGATAAAATTCAATGCAGCTTCTACGCAGGTCTTGCCATTTCTTGCACTTGGTTTGGGCGTGGATGACATGTTTCTGCTTGCTCACACTTATTCCTCTTCAAAAGACAAAACCAATGAACCAGCAGCATACTGTCTTGGCACCACTGGAGTCAGTGTGTTTTTGACATCTTTCAACAACATGTTTGCATTCTTCATGGCAGCATTAATACCCATCCCAGCTCTGAGGTCTTTTTCATTACAGGCTGCTATTGTCGTTGTGTTCAACTTTTTTGCCGTCATCTTGATCTTTCCTGCGATGATTGTTATAGACAAGAACAGAAGGAGCAGTGGCTATTTTGACCTGTTTTGCTTTTGTAGAAGGACTGAGCCACAAAGAATTTCAATAACTCCAAGCACGTCAGCAGACAGTAGTCTGGTCCTCCACCGTTACCACAACTCGTGTAACTCATTGTCAGATGCCTCGGCCGTTTTACAGGGTCTCAGTAGTACTGTCATACTTCCTGGTACTGTCCAGGCAACAGCGTCCCAAACAATACACTTACCAAGTGTTGTGACAGTCCAAGCCTCTGCGTTAGCGGAGCTGGGCAGTCCCCCGATGACACAGCGTCAGCACCAGAGACGGCTAGGTAGGAGAGGCAGACAGATGTCGGAATCAGACGACATTGAACTGTCAGCCATGGGAAACATCCGCAGCAGTAATGGGACTGGGACCTCTATTGCCAGAGCTGGGGCCTCGGCAAATCTTGTGCTGGCTTCTGAACAAAGAAATAGCAGAGACTCAAACATGAGACCTACATGTCAAGGCTACAACAGAGCATTAAAGGTTCACCCTGAAAAAAGTGCAAGTGATAGTTGTACATGCTCAGAAATCATGCCTGAGCATAGAAGCAAGAATCTTGCTCCCAAGAGTTTTTCAAGGGATAGTGTCATCAATGAAAATGCCAGATATCCTACTAAGAGTTATTCCCGGGACAGCATTATCAACGAAAATGCTGTTCTCTTCACCAGTAGAGGTGAGAGTAAAGCACGGACACAGACACAGAGTAGTGCGCCACGAAATGTGCAGATTCAGGTGTCAGCAAATGCTGCTTCTAATGGAGATACAGCTGTGGCAATGGCCGAGTGTTCTTCCATTAGGGACTCACCGAGATCATCATGTTCGCACTCTAGGTCTTCACCTGACATTGAGTCAATGGGAAGGGCCTCTACGTCGCAAAGTTTGCGGGACCCAGGTGCTGAGTCAAGCAGTAGGTGGAGTGTATTCAAGGAGAAGCTAAGTGTTCTCTCACTGTCCTACTTTGCAAGAGAATACTATGGTCCATGGTTGCAGCGAATGCCAATGAAGATCTCTGTCCTGTTTCTGTTTGCCTGTCTCTTTGCTGCTGGCGTATATGGCTGTATGAAAGTGGAGGAAGGATTGGACCTAACAGATGTAGTACCAAGAGGAAGCCCAGAGCACAAGTTTGTTGAGGCCCAGTTTGAGTATTTCTCATTTTACCAGATGGCTGCTGTCACCAAAGGAGGCTACGATTATGCTAATGGTCAGGAACTCTTGTACAAGTTCCATGAAGCTTTTAGGAAGATTCCAAACATAATTAAAACACCCGAGGATGATCTGCCACGTTTCTGGTTGATGTACTTTAGAGAATGGCTTGAAGGTCTGCAAGATGCATTTGACAAAGACTGGGAGAAAGGAGATATAACATATGAAGGATGGACAAAGAATGCATCTGATGATGGTGTGATAGCATACAAGCTGTTAGCTCAGACTGGggaaaaagaacagatcaacaGATCTATAGTACGTAGCGTGAGGTTGGTAAACAAGGAAGGGATAATTCGTCCAGAGACCTTCTACAAGTACCTGTTTGTCTGGTACAATATGGACTACTTGGGGACTACCATGTCACAGGCAAACATCAAGCCTGAGCCTGAGGAGGGTTGGTCTAACAAGAGAAGCAGTCAAGACTACAATGCCATGCGTGTTGAGCCTCCTCATCCTCCGATAAACTTTTCTTACATTCCCTTCAATCTGATCAACCTCAAGTACACAAAGGATTTCATCGAAACAATCAAGAGTGTCCGTGCCATATCTGAGGAGTTTTCGGCACTTGGCTTGCCCAATTATCCCACTGGTATCCCATTTATTTTCTGGGAGCAGTACATTTGGCTTGGAGAGCACCTTCTCACTGCTGTTGCCATCGTGCTAGCAGCAAGTTTCCTGGTCATGGCTGTCATCTTGTGCAATTTCTGGGCAGCAATGTTCATAgTGATAGTACTTGTGATGATCACAGTGGAGGTGTATGGCTTCATGGGATTGGCTGGTATTAAACTCAGTGCTGTCCCAGCAGTCACACTCATTCTTTCTGTTGGAGTTGGTGTGGAGTTTACTGTTCACATGTGTATGCAATTCTTGACCTGCAGGGGCGACAGAAACCAGCGCATGCAAAGAGCAGTTGAACACGTGTTTTCTCCAGTTGTGGACGGCGCTGTCTCGACATTACTTGGCGTTATCATGCTTGCAGGATCAGACTTTGATTTTATCGTCAGGTACTTCTTTCATCTACTGGCTGCGTTGATTGGCATTGGTACTTTGAATGGCCTGGTGTTTTTACCAGTTTTGTTATCTCTTGTAGGGCCCGGGCCTGAGTTGGAAGAAATTACGCCACCGGGAACAGCTTCGTCAACCGGATCAAACAGGGAGTTTCTACCAAGCTCCACGTGCAGGCAGAGAACCCCTCCAACCGACTCTGAGTTGTGTATTGTAACTAAACAAGAAGAACTTTCTTCGGCCTCCGGGGGGAGGCGTCCCCGTCGCAAGAGGGGTCCCCACAAAAGCAACAGTCGTGGAAACAAGCGCGCAAATCAAAACAGAAGTACACCTCCGGTGGATTCCGACTCGTCCAGTTCGACCGTTACTCGGGTGACCGCTCGAGCTACGGTCACAGTGGAAGTTCACACCGAACACACCTCGGAAAGGTCATCGTATCCGAACCATCGCACCGGAGCTCAAGTCGGAGGGCCCTTTCACAACGAGGGGGAAATAGGCGAGGAAGATTTGCATATTACGAACTTAGAAGAGTATGATGGTGATGTAAAGAGATAGGTGGACTGCAAAGAAATGTTGTAAACTGACACAACCTGAAAGAAAATATATGTTGACGTCGTCTCATCATTCCTTCCTTGGGCGAAAACGTGCGAGACGCGCATGTGCGGGATGCGATGCGTGTGCGACGTGAGTAACCTGGGTGTTCCCTCGCGTGTAGCGCGGAAACTTTCGAGTGAAGTATCGTGTCGGAGGCACGTTCAGTTCATTGTGACCTCCGCTTTTCACTAAAAAGACAGTAAAACTGGATTTTACTGGACCATTTTATAACTGTTACCGAAAGAAAGCGGTTTAGCTGATCACGTAAGATCTCATTTACAATTTAGATTCGAGACGACGAGTATTCACATTATTTATATTGGTGTACAAAGTTTAAAGATGTAAATTATCTGTCTACAAGCCGGCTTGTCCCATGTTAACCCAGTATATCTTGTAATTACATTTCTCAGTACGTAGAGTTAAAGTAAGGGTTTTGTATGTATTTATAGCAGGAAAGTGGCGAGGAAGGGAGCGATAGTGGACTTTCTTTAAAATGGCGACCGCAAGTTAAAATCGTTTTGTAGGATAATTACAGAGAGGAGCGCAAACATTTGatgcttttttcagcaaactcgttcccagtgtcCTTAGGTTTGGCAATCCGAGTCGCCGACATGTTGGATTGTCTAagaaagaccctgggaacgagattggttTTTCAGTGATTGGCATACTTGCGTGAGATGAACTATCCAATCAGAATACGGAAACCAATCAACGGTAACTTGAAGCctttagttgtttttttttggggggggggtgaggggaGATGTCCGCAAATTGTCATTGGAtatgtgacgtcatcaacaCTGAGAGTGTGTAAAACGTAGTCAGACTTTGGCGGGTCGTGCTTCAAAACTATGCACATAACGGAGCGTATGCAACCAGCCCCTAGAGACTAAAAGGACAGTGGCGTGGCGGCCATGCTGGTGTACCATGACAAAAGGAGCTAGCTAATAAGAAACCTTTTGTTAAAGGTACATCACCATGCCTGCGATACCCCCTATGGAAGAACACGGCTGAAACGGTAGCTAGGAAACGTTTTAACACCATATACATCAATTTCTTTGAGATAGCACGATTTAACATTTTCCaaaattgcaaacatttttGTTGTATCGGGCATCCCCCTAGTTAGTCAACCCTTAGTTTTTACAGCTGAAAGAACGTCTGGTTAATGAAACATTgttaaattacaaaagaaaaagtgttcttttcttttgctgtCTTTTGCTCAGTTTAACTTCAAGCTCTTTGAGCGAGCGGTCGTCATTTTTTCGAAAGGGGCATTTGTCGCTACATTCGTTGCTTTTCGAAGAGACGTTTGGGGCTGTAGTACCCTGTCGGTTTCATTTGTTGTTCGTTGATTCGTCTTAGTTGTTTACTGTTGTGGAGGAAAAGTAGGACCAGAAAAAAGTGAAGTGAGTTCTGGTCAGACTAATGTCCTCGAGCTGCCTCGATGTatttagtaaatcgaaaaattcatatatatatatatatatatatatatatatatttttttttttttttttttgagcagATGAAAAGAATTAAGACTGCTTTAGCATCTTAGGTTATTTGTTTGCGATGCGTGGGCATAGGATCGGAAAATTAGATAATCTTTTACCATGTTTACTCCTTGGTAACTTTTTATTGTGAGGTTGCCGTAATTTTCAATTGATGAAGGTTTTGTAACCCAAGACTTCAGTTACCCAATCAATCAGTTGTACTATATTAGAACGAGGCAGTAGTCCATAAGTTATTTATTTACCCAAACTGCATTCAGTAAGTCGATTGGCGGGAATCCAGACTCAAGCCCGTTCCAGTCTCCGAGTTAGTGGGGAAAACGCGAATTGAGAAAACGGGCGCGAAAAACACTTTGGGGCTGGGGCGCGTCTTATTTCGTGTTCTTCGtcgtccctactatctgagagcttGGAACAGGCTATCTAGACTCGGTCAGACTCGGTCAGGTCGATTCTATCTGTACACACGATGATGTAGCGTTCGTCGTTTAGTGGTTGGTCAAGAATACAGAATAAGAGACCAAAGGACAAATAGTAAATTATTATCACTAATAAACAATACCGGATATTTAATGAATAAAGTTACGTTAAATCTGTTAATTTTGTTCCATGGTACTGTAAGAAATTGCACCATTTCGAAATAAGCCTCCTGTATGGATGTCCCTTGGTCTAGTCACGCAAGGAGTGCGAAGCGAGCCCCCCAAAAAACTCTTCCCAGGAGGCTATTCGAGATTACACGTATTCAACGCCAATTCAACAGTTAATTTTGAAAGCGCGTTTGACCACCCCTTAAAAAATTTTGATTCAACTTCTATTTTGTTCTCAGGTATTAGATTTGTTCTGGGCACCTTGTACAACATCGTCGTGCAACAAGGTTGTATTTGACGATGCACCGTAATGTTGGATCCGTGTAACCGAGGTCCTAATGGGTGTTGTTTAACTTTGTGCAGCAAAGAGTTGCATTCCACAATGTTAAATGACATTGAATCCGTTTGACTGTAACTGAGGCCTAATGGCTGTCGATAGTGCTCTAGTGGATCCCACTGTTTCGGTAACTAATGGAATGCCCCACGTCGTTATATGTTTGGCGTGGACGAATTTTTTGTTGTCTTCAAGCACCGTTATAAGATCCCCTCCCTAAACTCGGAAACGTCTTTAGGGCATTGCTCATAATCCCATTTCTTTTACCGTCCTCTCATTCCAAATTTGGATGTTACTAAGAATTAGAATGGCGTTGGACTTAAGCCCGTCCTAACATTACTTCAGGCGCCGAAAATTCCACAAGCTTGGTGGCCAAATAGGGAACTTCAATCGCAGACGATCGTGAGCCACGGACGATAATCGGAAGACAAATGCTCCTTCTGTGACTTGATTTTACTCCTCATCATGTTCGATTGAAGCTGGAAACTCACTGTCGTGGTGTCCACTGGCTTGTCATTATGAACGTGAAGACACAACTTCTGGTTGCCACCCGTGGTTCACAAATGACTTCACGTAGTCCCTTTTTTTTTATCTCGTTACGCGGGCCGGAGCAAGCAGTGAAGCATGTGAGCGAGCAGTTAGAGCTGCGCCCGCTGCACCGCGAAAACTCGAGATGTTTAGTTTTCGTAGGCTAACTAATGCGCGCTTCTACGTTTAGATGTCGGATCCTATCATTTCTCACCTCGGATTTTCTTGGCTCCGCCATCCACTCTCTGAACACAAAGGGCTCAAACAAACTTCTACAACGTTTATAGAGCCCTATCACCGTGATACGCTCCTGACGTATGAGTAAACGACTAGCCTGTGTATAGCAGCCCGCTCTCCTCAAGAAAAAATCGGAGGAAGGAGAGCGGCCGGGCCGTTGTACACAGGTTAGTAAACGACAAACACATAGCCTTCCAATCGCCAGAATTCGCCGCTGAGCCTGGCCGCAGAGACGACAAAATACCATGGCTGAGGTAATTTAACGAGAATATAAATATTCCTCTCAAGTAATTTGCCATCAAACCTTTTCGCTAGGCCCATCCATTCTAGACTACgagctctctctctctctctgtttcCGCTCAGGGATCACGCGTAAAGGATACGAGTGAGCGTGGAGCCGTGACGCGCGTGTACCGAGCCGCGCGTGTTGTCGTGTTAGGAGCGGGCGCGTCACTTTTCCATGGCCACGAGGCAGGCGATTTTCTCGGTTGCTCGCGTGAACgtaaagagagactgctcgttgTCTACCTCTTGTCTACATGCATTCCACCTTGTAGGGTGCCTTGTgcctgaacgcctggaacaggttgGAGCGCTCGTTACCAAGTGGACAGTTGGACTGTACCAATCTGGTGGGCGCTGATTCTCACGGCCGACCCTGTTCCCTTCTTTACAGATAACGCGATGTTTTCCTGTGTTTTGCGTTCAAGGATCATTTTTGTCTCCCTGTACTTATATTTCTGTTCAAACAACTTAACGTACAACGACATTTAACGCCAAAGATGCTTCATTCACTTTTGGAAATGGATGAATTAGAGCTGTGCGGCCCagaattaaaagaaataaatacaaTTTTTCATACAGGCCTAACCCCCTCAAAACATTCCTCATCTCAGGCCAAGATGGCAGGAAAAAAACCTATACCTTCAAACCCAatgtattcagtttttttttaatctctgaCGTCCGGTTTGACTTTTCCTATATCAGTCCCTGAGTCTCCGAGGATGACGTTGTTATGAAAATTAACTATTAACCATTTCATttttacaaatcaaaattgacCATGTAAAATTAATTATAAACATCTATCGCCTGCGACCTGCAGCAATATTCTGTTTCCCTGGtgaaatttattgtttttgt

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02460 all species →	Patched	Patched family	Family	Interproscan
PF12349 all species →	Sterol-sensing	Sterol-sensing domain of SREBP cleavage-activation	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003392 all species →	Family	Protein patched/dispatched	Interproscan
IPR000731 all species →	Domain	Sterol-sensing domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46022 all species →	PROTEIN PATCHED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005119 all species →	Molecular Function	smoothened binding	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0008158 all species →	Molecular Function	hedgehog receptor activity	Interproscan
GO:0045879 all species →	Biological Process	negative regulation of smoothened signaling pathway	Interproscan
GO:0097108 all species →	Molecular Function	hedgehog family protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06225	PTCH1; patched 1	-	Basal cell carcinoma	ko05217	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of FUN_042119-T1 across 85 RNA-seq samples of Siderastrea siderea. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

85Samples

83TPM > 0

7Conditions

596.8Max TPM

276.5Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
holobiont · low.pH_high.temp	20	20	323.79	571.48
holobiont · low.pH Control.temp	20	19	256.55	579.66
holobiont · control.pH_high.temp	20	20	291.58	596.77
holobiont · control.pH Control.temp	19	18	315.29	538.31
Whole organism	4	4	13.46	16.73
unannotated	1	1	5.50	5.50
live coral tissue/skeleton	1	1	15.02	15.02

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR22214406	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	571.48
SRR22214416	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	477.03
SRR22214418	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	467.58
SRR22214414	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	419.04
SRR22214420	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	414.57
SRR22214413	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	413.02
SRR22214409	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	394.55
SRR22214421	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	380.25
SRR22214403	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	333.12
SRR22214408	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	332.51
SRR22214402	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	325.94
SRR22214407	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	287.20
SRR22214423	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	272.69
SRR22214410	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	260.59
SRR22214412	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	247.72
SRR22214405	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	232.81
SRR22214419	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	176.56
SRR22214404	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	172.75
SRR22214415	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	164.79
SRR22214417	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	131.52
SRR22214436	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	579.66
SRR22214429	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	508.49
SRR22214428	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	506.51
SRR22214438	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	410.22
SRR22214430	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	361.21
SRR22214445	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	304.19
SRR22214431	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	270.60
SRR22214434	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	262.75
SRR22214443	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	239.17
SRR22214425	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	238.94
SRR22214442	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	227.69
SRR22214424	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	208.44
SRR22214437	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	196.03
SRR22214441	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	173.61
SRR22214439	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	169.51
SRR22214435	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	145.53
SRR22214427	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	117.65
SRR22214426	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	106.13
SRR22214440	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	104.67
SRR22214432	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214458	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	596.77
SRR22214453	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	453.70
SRR22214460	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	423.11
SRR22214462	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	387.66
SRR22214447	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	348.30
SRR22214450	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	346.82
SRR22214467	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	334.17
SRR22214452	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	314.89
SRR22214465	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	312.79
SRR22214446	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	283.89
SRR22214461	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	281.53
SRR22214456	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	273.90
SRR22214464	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	273.42
SRR22214459	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	260.24
SRR22214454	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	231.37
SRR22214463	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	220.95
SRR22214457	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	204.71
SRR22214448	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	123.73
SRR22214451	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	91.44
SRR22214449	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	68.14
SRR22214547	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	538.31
SRR22214471	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	529.18
SRR22214400	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	495.44
SRR22214468	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	479.28
SRR22214506	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	473.59
SRR22214481	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	437.31
SRR22214422	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	402.27
SRR22214444	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	358.55
SRR22214411	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	336.08
SRR22214466	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	317.70
SRR22214469	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	313.09
SRR22214548	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	300.17
SRR22214470	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	264.75
SRR22214524	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	236.67
SRR22214535	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	198.92
SRR22214433	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	154.49
SRR22214492	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	106.19
SRR22214455	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	48.57
SRR22214546	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR14295601	Whole organism	Whole organism	not recorded	not recorded	SRP315757	16.73
SRR14295600	Whole organism	Whole organism	not recorded	not recorded	SRP315757	14.86
SRR14295604	Whole organism	Whole organism	not recorded	not recorded	SRP315757	13.16
SRR14295603	Whole organism	Whole organism	not recorded	not recorded	SRP315757	9.08
ERR12861049	unannotated	not recorded	not recorded	not recorded	ERP159209	5.50
SRR12454619	live coral tissue/skeleton	live coral tissue/skeleton	not recorded	not recorded	SRP277390	15.02

Source: CnidoSite RNA-seq expression matrices (SSIDE_TPM, StringTie quantification over 85 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.