Gene detail

Detailed information of FUN_042225-T1 in Acropora pulchra

Genomic Location: ptg000036l:2242048...2266555
NR annotation: XP_015769828.1, PREDICTED: protein strawberry notch-like isoform X3 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q5BJL5	Protein strawberry notch homolog 1 OS=Rattus norvegicus OX=10116 GN=Sbno1 PE=1 SV=2
Q689Z5	Protein strawberry notch homolog 1 OS=Mus musculus OX=10090 GN=Sbno1 PE=1 SV=2
A3KN83	Protein strawberry notch homolog 1 OS=Homo sapiens OX=9606 GN=SBNO1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13872	AAA_34	P-loop containing NTP hydrolase pore-1	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR026741	Family	Protein strawberry notch	Interproscan
IPR039187	Domain	Strawberry notch, AAA domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12706	STRAWBERRY NOTCH-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0031490	Molecular Function	chromatin DNA binding	Interproscan
GO:0042393	Molecular Function	histone binding	Interproscan