Gene detail

Detailed information of FUN_042606-T1 in Acropora pulchra

Genomic Location: ptg000039l:279097...284788
NR annotation: XP_029213278.1, transcription factor AP-1-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P05412	Transcription factor Jun OS=Homo sapiens OX=9606 GN=JUN PE=1 SV=2
P54864	Transcription factor Jun OS=Serinus canaria OX=9135 GN=JUN PE=2 SV=1
P05627	Transcription factor Jun OS=Mus musculus OX=10090 GN=Jun PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001571 (this species only)
Transcription factor family	TF_bZIP · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03957 all species →	Jun	Jun-like transcription factor	Family	Interproscan
PF02493 all species →	MORN	MORN repeat	Repeat	Interproscan
PF00170 all species →	bZIP_1	bZIP transcription factor	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005643 all species →	Domain	Jun-like transcription factor	Interproscan
IPR003409 all species →	Repeat	MORN repeat	Interproscan
IPR004827 all species →	Domain	Basic-leucine zipper domain	Interproscan
IPR046347 all species →	Homologous_superfamily	Basic-leucine zipper domain superfamily	Interproscan
IPR002112 all species →	Family	Transcription factor Jun	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43215 all species →	RADIAL SPOKE HEAD 1 HOMOLOG	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003700 all species →	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0007286 all species →	Biological Process	spermatid development	Interproscan
GO:0031514 all species →	Cellular Component	motile cilium	Interproscan
GO:0035082 all species →	Biological Process	axoneme assembly	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03905	FGG; fibrinogen gamma chain	-	Glycosaminoglycan binding proteins	ko00536	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.