Detailed information of FUN_042619-T1 in Acropora pulchra

Genomic Location: ptg000039l:423805...436172
NR annotation: XP_029198028.2, uncharacterized protein LOC114963062 isoform X1 [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6IVV8Polycystin-2 OS=Danio rerio OX=7955 GN=pkd2 PE=1 SV=1
Q9WUD2Transient receptor potential cation channel subfamily V member 2 OS=Rattus norvegicus OX=10116 GN=Trpv2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000582 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00520
all species →		Ion_transIon transport proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005821
all species →		DomainIon transport domainInterproscan
IPR024862
all species →		FamilyTransient receptor potential cation channel subfamily VInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10582
all species →		TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005216
all species →		Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811
all species →		Biological Processmonoatomic ion transportInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0055085
all species →		Biological Processtransmembrane transportInterproscan
GO:0005262
all species →		Molecular Functioncalcium channel activityInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0005887
all species →		Cellular Componentplasma membraneInterproscan
GO:0098703
all species →		Biological Processcalcium ion import across plasma membraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_042619-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP