Detailed information of FUN_042775-T1 in Acropora pulchra

Genomic Location: ptg000043l:71684...73998
NR annotation: XP_015747530.1, PREDICTED: histone H2B-like [Acropora digitifera]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P35067Histone H2B OS=Acropora formosa OX=126732 PE=3 SV=1
P35059Histone H4 OS=Acropora formosa OX=126732 PE=3 SV=2
Q6LAF1Histone H4 OS=Dendronephthya klunzingeri OX=84964 GN=H4DEKL PE=3 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000395 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02969
all species →		TAFTATA box binding protein associated factor (TAF)DomainInterproscan
PF00125
all species →		HistoneCore histone H2A/H2B/H3/H4DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009072
all species →		Homologous_superfamilyHistone-foldInterproscan
IPR019809
all species →		Conserved_siteHistone H4, conserved siteInterproscan
IPR001951
all species →		FamilyHistone H4Interproscan
IPR004823
all species →		DomainTATA box binding protein associated factor (TAF), histone-like fold domainInterproscan
IPR000558
all species →		FamilyHistone H2BInterproscan
IPR007125
all species →		DomainHistone H2A/H2B/H3Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23428
all species →		HISTONE H2BInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0046982
all species →		Molecular Functionprotein heterodimerization activityInterproscan
GO:0000786
all species →		Cellular ComponentnucleosomeInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0030527
all species →		Molecular Functionstructural constituent of chromatinInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_042775-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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