Detailed information of FUN_042821-T2 in Acropora pulchra

Genomic Location: ptg000047l:529070...540636
NR annotation: XP_015758657.1, PREDICTED: GTPase-activating protein and VPS9 domain-containing protein 1-like [Acropora digitifera]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A2RV61GTPase-activating protein and VPS9 domain-containing protein 1 OS=Xenopus laevis OX=8355 GN=gapvd1 PE=2 SV=1
Q14C86GTPase-activating protein and VPS9 domain-containing protein 1 OS=Homo sapiens OX=9606 GN=GAPVD1 PE=1 SV=2
A5D794GTPase-activating protein and VPS9 domain-containing protein 1 OS=Bos taurus OX=9913 GN=GAPVD1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006034 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02204
all species →		VPS9Vacuolar sorting protein 9 (VPS9) domainFamilyInterproscan
PF18151
all species →		DUF5601Domain of unknown function (DUF5601)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003123
all species →		DomainVPS9 domainInterproscan
IPR045046
all species →		FamilyVacuolar protein sorting-associated protein 9-likeInterproscan
IPR037191
all species →		Homologous_superfamilyVPS9 domain superfamilyInterproscan
IPR041545
all species →		DomainRABX5, catalytic core helical domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23101
all species →		RAB GDP/GTP EXCHANGE FACTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005085
all species →		Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0016192
all species →		Biological Processvesicle-mediated transportInterproscan
GO:0030139
all species →		Cellular Componentendocytic vesicleInterproscan
GO:0031267
all species →		Molecular Functionsmall GTPase bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_042821-T2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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