Detailed information of FUN_042900-T1 in Acropora pulchra

Genomic Location: ptg000047l:1470871...1485050
NR annotation: XP_015765581.1, PREDICTED: E3 ubiquitin-protein ligase RNF213-like [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0A0R4IBK5E3 ubiquitin-protein ligase rnf213-alpha OS=Danio rerio OX=7955 GN=rnf213a PE=3 SV=1
Q63HN8E3 ubiquitin-protein ligase RNF213 OS=Homo sapiens OX=9606 GN=RNF213 PE=1 SV=3
E9Q555E3 ubiquitin-protein ligase RNF213 OS=Mus musculus OX=10090 GN=Rnf213 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000236 (this species only)

 Pfam domain
No Pfam domain signature was detected for FUN_042900-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR031248
all species →		FamilyE3 ubiquitin-protein ligase RNF213Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22605
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →		Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016887
all species →		Molecular FunctionATP hydrolysis activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_042900-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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