Detailed information of FUN_042901-T1 in Acropora pulchra

Genomic Location: ptg000047l:1487083...1499825
NR annotation: XP_044174622.1, E3 ubiquitin-protein ligase rnf213-alpha-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0A0R4I9Y1E3 ubiquitin-protein ligase rnf213-beta OS=Danio rerio OX=7955 GN=rnf213b PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000236 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20173
all species →		ZnF_RZ-typeRZ type zinc finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR031248
all species →		FamilyE3 ubiquitin-protein ligase RNF213Interproscan
IPR046439
all species →		DomainZinc finger, RZ-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22605
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →		Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016887
all species →		Molecular FunctionATP hydrolysis activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_042901-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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