Gene detail

Detailed information of FUN_042910-T1 in Acropora pulchra

Genomic Location: ptg000047l:1651701...1669221
NR annotation: CAH3041662.1, unnamed protein product [Porites lobata]
Species Acropora pulchra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_042910-T1

ATGGAGGTGAGAAACTGCTGCGAAAGAATTCTCTCAAGAATATTTCATGTAACATTAACAGCAGGAATCGTTCTCATTCTTGTTCTTAAAAACACAGAACTAAGACGAGCTTGTTTAAATGGTGACTGGTTGTATGTCGCTGGATTCTTCTCGCTTTGCTTCTTTGGCTTTATATTTTACTTCGTTGCAAGCTGTATGGATCCTGGTTTTGCGGAAATAAGTGGTGAAAAAAGCATAATGGTCGCCTTTGAGAAAACAGAATCAGAAAATGATATAGAAAGTCAATCTGATGGTGAAGATGCAGAGGAGTCCTGCAAAATCTTAGCTACACCTCCATTAGGTGGATCCAGATTGCGCCGCTGTGGGTATTGTGCAATCCTACAGCCATTGCTTGCTAAGCATTGTGAAGACTGTGGTCGTTGTGTTAGGCGTTATGACCACCATTGCCCATGGCTTGGTAACTGTGTTGGTGAAAGAAATCACAGATTTTTTTGGTGTTTTCTCCTAACGCAATGCATGCTCATTGCATGGGCTGCTGAAATCTGCTGGTACGCTTTTGTTCACAAGAAAACTTGGTTGGACTGGTTTGTCGCCAATGGGTTCCTGATTCTTGCCTTGTGTGTACTTTGCCTGACTTTTATTGTAGTGTCTCTTCTATTTTGCTGTCATTCATATCTAATGTTTACTGCCCAGACAACTTGGGAATACATGTCCCGATCAAGAATTTCATATTTAAAAACTCTTAGTGAAGATGTCAATCCATTTGACCAAGATCTATGTGGGTTTGTCATGGGACAAGCTTTTGACTCAAGAAAAATTCCTATGGAAACTCAGCGTGTGTTGTACGCGTATCAAAGAAATCAAGTGGACGAGGATGGAGAACCTGAGCCGATTCCAATCCCAGGAAGCTTCAATGGAAGAATACCACAAATCGTGGAGTTGGTCACGAAAGGCCATCACTTTTTCCAAAGTCGCATGGAATCCCTGGCAAGCACTGTATTCAAGTGTAGTTTCTTCGGTGCACCATTTGTTGCCATAACTGATTACGAAGGGATGCAGTGTATATTTGACCCAAAATTTGTTGAAAAAGAGCCCGGGTTTGGGAATTTCAGATTCAACCAAAGTCTTCTAGAAGATCACGTACCTTCAATGTTTGAAAACGGTGACAGACATAGGCAGCTCAAGTCGTTTTTGATCGCGATCTCACAGAATATGCTAAGGATGGGTCGCTTGATCCCGAACGTCATGGATATAATACCAGAACATCTCATAAAGTGGAACTTCAAAGAGGGTCAAGGGTCCCCAAGTCAAGAAGAATGGGAAGAGAGAATACTGCATCTTTCAATGGACATACTTAGCGAATGTATGTTGGGTATACGTTTGAGTGGACACAGCTTCATACAGTGGAGATTTGAAGTGCTCAAGGAGGAAAGGACATGTTTTGGCAAACCAAGAGGGAAGTACAAGAAAGCGCTTCACGCATTTAATCACTTAAAAGAAGCAATAGCAAATGCTCCTGATATTGAACCTATATTTAAAGAAGCTGAAAAAGTTGGGCTAACTGAAGAGGAAGCGGTGCTGGAGATTCTCTGGATGTTGAACTTCAATGCAGCCCCCGGCACGGGAGCGGCCATGCGGTCAGCAGCTGCTCGCTTGTCAGTTATGACTACTGAGGAACGGAGGGAACTGAGATCAGAAATCCGAGAATGCCTGGGACCAATTGGACTGAATCTCAAGACACTCCATAAGATGAAAAAGTTAGATAACTTAGTGTGCGAGGTTCTCAGACTTTACCCGCCCGTTGCGTTATACTTTGGAGTTGCCAGGCGACCTTTCATCATGAAGTCAAGTTCCGGAACTTACCACATTCAAAAAGGACAGAAAATCGTTGGCAGTTGTCATTTGGCTCAGAGAGATAAGGAAGTTTTTTCTGTTGAGGGCTGCAAGGAAGTGGACGAATTTGATCCAACCAGATTCAACAAGAAGGGCCTCAAATCCAAACTCATTTGTGCGCATGGTCCATTATCCGAGCCTCCATCGCCAGACAATCACAAATGCACAGGAACGAACGTTGGTTACGTAATAATCAAGTGCTTTGTTATGTACTTGATCATGTTCTGCGATTGGAACTTAGAGGAGAAGCCCTACTGGACTGATAAATCACTTGTCCGTTATGGAAATCCAGATGAACCCATTAGACTAAAATACTTTAAATATACAAGAGACAAGGAAGAGTTGTTGCTTCCTGATCAACCTGACAGTTCCAGCAGCAGTGAAGATGATGAAAACCAGGACGCTGACACTGTGATCAGTGAGTGTCCTGTGGAGGAACCGGATGCAGAGGGGAATTGTCCGGTTTAA

Transcript

FUN_042910-T1

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
E7F021	Palmitoyltransferase ZDHHC12-B OS=Danio rerio OX=7955 GN=zdhhc12b PE=3 SV=1
B0S5D5	Palmitoyltransferase ZDHHC12-A OS=Danio rerio OX=7955 GN=zdhhc12a PE=3 SV=1
B3LF83	Probable inactive linolenate hydroperoxide lyase OS=Arabidopsis thaliana OX=3702 GN=CYP74B2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002030 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01529 all species →	DHHC	DHHC palmitoyltransferase	Family	Interproscan
PF00067 all species →	p450	Cytochrome P450	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036396 all species →	Homologous_superfamily	Cytochrome P450 superfamily	Interproscan
IPR001594 all species →	Domain	Palmitoyltransferase, DHHC domain	Interproscan
IPR001128 all species →	Family	Cytochrome P450	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22883 all species →	ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004497 all species →	Molecular Function	monooxygenase activity	Interproscan
GO:0005506 all species →	Molecular Function	iron ion binding	Interproscan
GO:0016705 all species →	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0020037 all species →	Molecular Function	heme binding	Interproscan
GO:0016409 all species →	Molecular Function	palmitoyltransferase activity	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0005794 all species →	Cellular Component	Golgi apparatus	Interproscan
GO:0006612 all species →	Biological Process	protein targeting to membrane	Interproscan
GO:0018230 all species →	Biological Process	peptidyl-L-cysteine S-palmitoylation	Interproscan
GO:0019706 all species →	Molecular Function	protein-cysteine S-palmitoyltransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_042910-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.