Detailed information of FUN_042959-T1 in Acropora pulchra

Genomic Location: ptg000047l:2434382...2443747
NR annotation: XP_029212491.2, LOW QUALITY PROTEIN: NMDA receptor synaptonuclear signaling and neuronal migration factor-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B8PYG1NMDA receptor synaptonuclear signaling and neuronal migration factor OS=Danio rerio OX=7955 GN=nsmf PE=2 SV=1
Q9EPI6NMDA receptor synaptonuclear signaling and neuronal migration factor OS=Rattus norvegicus OX=10116 GN=Nsmf PE=1 SV=1
Q99NF2NMDA receptor synaptonuclear signaling and neuronal migration factor OS=Mus musculus OX=10090 GN=Nsmf PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009453 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00612
all species →		IQIQ calmodulin-binding motifMotifInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000048
all species →		Binding_siteIQ motif, EF-hand binding siteInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR033374
all species →		FamilyNMDA receptor synaptonuclear signalling and neuronal migration factorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR32061
all species →		NMDA RECEPTOR SYNAPTONUCLEAR SIGNALING AND NEURONAL MIGRATION FACTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0048168
all species →		Biological Processregulation of neuronal synaptic plasticityInterproscan
GO:2001222
all species →		Biological Processregulation of neuron migrationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_042959-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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