Gene detail

Detailed information of FUN_042987-T1 in Acropora pulchra

Genomic Location: ptg000047l:2755182...2756189
NR annotation: XP_044173409.1, LOW QUALITY PROTEIN: torsin-1A-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q60HG2	Torsin-1A OS=Macaca fascicularis OX=9541 GN=TOR1A PE=2 SV=1
O14656	Torsin-1A OS=Homo sapiens OX=9606 GN=TOR1A PE=1 SV=1
O14657	Torsin-1B OS=Homo sapiens OX=9606 GN=TOR1B PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001479 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06309 all species →	Torsin	Torsin	Family	Interproscan
PF21376 all species →	TOR1A_C	Torsin-1A, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010448 all species →	Family	Torsin	Interproscan
IPR001270 all species →	Family	ClpA/B family	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR017378 all species →	Family	Torsin 1/2	Interproscan
IPR049337 all species →	Domain	Torsin-1A, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10760 all species →	TORSIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0051085 all species →	Biological Process	chaperone cofactor-dependent protein refolding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K22990	TOR1; torsin-1	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.