Detailed information of FUN_043031-T1 in Acropora pulchra

Genomic Location: ptg000047l:3154160...3172560
NR annotation: XP_029213555.2, uncharacterized protein LOC114977110 isoform X2 [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9FN03Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana OX=3702 GN=UVR8 PE=1 SV=1
Q9VR91Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster OX=7227 GN=HERC2 PE=1 SV=3
Q8SSY6Bifunctional serine/threonine-protein kinase/NEDD4-like E3 ubiquitin-protein ligase OS=Dictyostelium discoideum OX=44689 GN=DDB_G0276527 PE=3 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008705 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00415
all species →		RCC1Regulator of chromosome condensation (RCC1) repeatRepeatInterproscan
PF00071
all species →		RasRas familyDomainInterproscan
PF13540
all species →		RCC1_2Regulator of chromosome condensation (RCC1) repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009091
all species →		Homologous_superfamilyRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIInterproscan
IPR014756
all species →		Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR005225
all species →		DomainSmall GTP-binding protein domainInterproscan
IPR000408
all species →		RepeatRegulator of chromosome condensation, RCC1Interproscan
IPR051210
all species →		FamilyUbiquitin ligases and GEF domain-containing proteinInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR001806
all species →		FamilySmall GTPaseInterproscan
IPR017868
all species →		RepeatFilamin/ABP280 repeat-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22870
all species →		REGULATOR OF CHROMOSOME CONDENSATIONInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005525
all species →		Molecular FunctionGTP bindingInterproscan
GO:0003924
all species →		Molecular FunctionGTPase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_043031-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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