Detailed information of FUN_043098-T1 in Acropora pulchra

Genomic Location: ptg000047l:4107089...4117854
NR annotation: XP_044174972.1, tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q08BM0tRNA methyltransferase 10 homolog B OS=Danio rerio OX=7955 GN=trmt10b PE=2 SV=1
Q08DP1tRNA methyltransferase 10 homolog B OS=Bos taurus OX=9913 GN=TRMT10B PE=2 SV=1
Q6PF06tRNA methyltransferase 10 homolog B OS=Homo sapiens OX=9606 GN=TRMT10B PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002140 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01207
all species →		DusDihydrouridine synthase (Dus)FamilyInterproscan
PF01746
all species →		tRNA_m1G_MTtRNA (Guanine-1)-methyltransferaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035587
all species →		DomainDUS-like, FMN-binding domainInterproscan
IPR028564
all species →		DomaintRNA methyltransferase TRM10-type domainInterproscan
IPR016009
all species →		DomaintRNA methyltransferase TRMD/TRM10-type domainInterproscan
IPR013785
all species →		Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR038459
all species →		Homologous_superfamilytRNA methyltransferase TRM10-type domain superfamilyInterproscan
IPR007356
all species →		FamilytRNA (guanine-N1-)-methyltransferase, eukaryoticInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13563
all species →		TRNA (GUANINE-9-) METHYLTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000049
all species →		Molecular FunctiontRNA bindingInterproscan
GO:0002939
all species →		Biological ProcesstRNA N1-guanine methylationInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005654
all species →		Cellular ComponentnucleoplasmInterproscan
GO:0009019
all species →		Molecular Functionobsolete tRNA (guanine-N1-)-methyltransferase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_043098-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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