Genomic Location: ptg000047l:4121627...4136777
NR annotation: XP_029182934.2, protein SMG7-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families
| CDS |
| FUN_043099-T2 |
| Transcript |
| FUN_043099-T2 |
| Protein |
| FUN_043099-T2 |
| UniProt accession | Description |
|---|---|
| Q92540 | Nonsense-mediated mRNA decay factor SMG7 OS=Homo sapiens OX=9606 GN=SMG7 PE=1 SV=2 |
| Q1LVF3 | Nonsense-mediated mRNA decay factor SMG7 OS=Danio rerio OX=7955 GN=smg7 PE=2 SV=2 |
| Q5RJH6 | Nonsense-mediated mRNA decay factor SMG7 OS=Mus musculus OX=10090 GN=Smg7 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005735 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF10373 all species → | EST1_DNA_bind | Est1 DNA/RNA binding domain | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011990 all species → | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR045153 all species → | Family | Est1/Ebs1-like | Interproscan |
| IPR018834 all species → | Domain | DNA/RNA-binding domain, Est1-type | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15696 all species → | SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0000184 all species → | Biological Process | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Interproscan |
| GO:0005697 all species → | Cellular Component | telomerase holoenzyme complex | Interproscan |
| GO:0042162 all species → | Molecular Function | telomeric DNA binding | Interproscan |
| GO:0070034 all species → | Molecular Function | telomerase RNA binding | Interproscan |
FUN_043099-T2.
