Gene detail

Detailed information of FUN_043250-T1 in Acropora pulchra

Genomic Location: ptg000047l:5933733...5939376
NR annotation: XP_029198536.2, zinc transporter Slc39a7-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_043250-T1

ACCACAGGCTTTAGAAATACCGGCAAAGGTCGAATCTGTGAATATTTGGTGGTGGATCGAAAGAAGATGGCATTTAGGACACAGTACGTTTTTCTTGCCTTATTTTGCTCAGCAGTTGTAACTGCTCTGGATGGTGATCATGAAGGCATCGAGGTAGAACATGGCGATCATGTAAAATACTTCGAACGAGAAGACGAACACCAACATGATCATGAAGGACATCATCATCATCATCACGGACACAGCCACGAATTTGACCACCATCACGGTCATGATGATCATCATGGTCATAGCCATGAGTTTTATCACGAAGATATCCACGAAGATTTTGAACATCCAGCTATGAAATATACGAAAGAAGCCCAAATTCCTCACGGAAATCAACAAGCTGGCAAGCACGACCATCATGATTCTCAGCATGGACACGGCCACGACTCTCACCACGGACACAGCCATGAACCTCACCACGAACACAGCCATGAACCTCAGCACGGACACAGCCATGAATCTCACCACGGACACAGCCATGAGCAGTTTGAACACCCCGCTAAGAAATATCAAAAGCAAGCTCAAGGCCCTGGAAAACCTTCCGCTGCGAAAACTAAAGCTTCTCTCAAACCTTCTCCTGAAAAGAAGGACAGATGGACCAAGTGGTTGCAGGCTATCGCTGCCACGTTGCTGATCAGCGCGGCTCCGTTCTTCATCCTTTTCTTTATCCCACTTCAGAGCAATTCAGCCGATCAACAACCGCTTCTAAAAGTTCTTCTGGCTTTTGCCTCAGGCGGGCTTTTGGGGGATGCGTTTCTGCATTTGATCCCTCATGCCATTTCACCTCACTCGCATCATGGCGAACATACACACGACCATTCGCCTTCTCATTCCCATGAGGCTCATTCACATGAGAGTGCACACGATCATTCCTCTGAAATGGTAGTTGGTCTTTGGGTTCTAGCTGGCCTGATCGCGTTTTTGATGGTAGAGAAATTTGTTCGACTTGTGAAAGGCGGTCATGGACATTCTCATTCACATGGTGTCCCACAGACGAAGGATAAAAATGGAGATGTTGCTCACAAAGATCAAGAACCACTATCCGAAGAAACCGACCAGGAATTAAAAGAAACAAAAAAGGCAGAGGAAGTTAAACAAAGCGAGAAAGATGAGACCGAAACTACGCCAGTTCAAGACCATGATCATGTTGAGGAGATCAAGGTAGCTGGGTACTTGAATCTTGCTGCAGATTTCACTCATAATTTTACTGATGGACTTGCCATTGGGGCATCATTTCTCGTTAGCCGCAACTTGGGAATAATCACTACTCTCACAATTCTCCTACATGAAGTTCCTCATGAGATTGGGGACTTTGCAATCCTAGTTCAGTCAGGTTGCAACAAGAAAAAGGCAATGCTCCTTCAACTGACGACAGCAACAGGAGCTCTTGCGGGGACATTCTGTGGTTTATTGGCTGAAAACATCGGAGAATCTGCCACACTGTGGATTCTGCCTTTCACGGCAGGGGGGTTTATTTATATCGCAACTGTTTCTGTCATCCCTGAGTTACTAGCAGACACTAAAGTAGGACAGACGATAAAAGAGCTCATAGGATTGTTTGTGGGTGTTATGATGATGGTGTTAATTGCTAAATTTGAGTAAGACAATGTGCACACCAGGACTTGTAGAACTTTTTGTGTGATTATTGTTATGGTTGCAACTCTCACAGAGAAAGTTAAAACTTAGTTCCAAGTCCATGGCAAGCATTTGAAACAGATGGGAGAATCGGCTAGGGTTGTCAACTCTCAAGAATTCCTCTCAATGGCCCTCACATTTCCTTCATTATTGAATGATTGTTTTGCAGGCTAATGTTCCAAACCTGTTAGGAAAAATTTTATGTGGAACATTGGACCTTTTGTTAATAATTTGCAGATCACCAGGTTTAAATTATTGTAGTCATTGCTGTTTAAGTCTGAAGTGTAAATCTTCAAAGGTTCAAAGTGATCCACTTTGTCAGTTTTTATTCTCAGCAGCCCACCGTGGTTCCAGATATTGTAAATTGATCTCAGTTGACCATTTCTGAGTTCCCCTCAGTTTATTTTTCAAAGCAAGCGTAAGTGCAAAATTTTTCTCTTGGAAATTAGTTCTACTTTCATTATGAATGATCAATGATATTCAGAATAAAGACTTTGCTTATAGACTCACTTTGAAGTAGAGGCTGAAGTGAATTCAAAAATGGCACATTATTGAGATCTTTATGTTCATCTTTCATATTTACTGTCCTTCCTAACATCAACAATCATCATCAGAAGTGTTGAGTCACATAGAAGTTAAGAAATAATTATTATTATGAATTTTTCATAAAACCAGTTTCCTTTGCAATTGCTTGAATTACCGACAAAACAGTGGTGTAAAAAAACAAACCCAACTGTCCAGAAGCAGTCAGCCAGCAATTCTCAAAGGAATGAAGAGTGCCATGTTAATGGCAAAGTTAAACATGAATATTTGGAATATAAGAAGAGTTGACAAAGGGCTAATGCTTTGTAATCTTACTGCAGCAATTTGACCAATACCAACTTGCTTGATAAACCAAGTTTTCAAGCAATTGATGAACCGTAGTGGGATAAAATTTAGGACTACTGAAGAAGAATAAAATAACCATTTTATAATAATAATTATTATTAATCCAGCTGGTATTGATAGTGTAATTTGAACACAACCACCTACTACCATCAGCTCCTCACACATCAAAGATTTTCATTTAGCAAAACGTTTTATTGATATTTTGTTTAATTTAAAAAAAATCCATTATAAGCCATGTTTCCTTTCTACTGCTC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9PUB8	Zinc transporter Slc39a7 OS=Danio rerio OX=7955 GN=slc39a7 PE=2 SV=2
Q31125	Zinc transporter SLC39A7 OS=Mus musculus OX=10090 GN=Slc39a7 PE=1 SV=2
Q6MGB4	Zinc transporter SLC39A7 OS=Rattus norvegicus OX=10116 GN=Slc39a7 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002061 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02535 all species →	Zip	ZIP Zinc transporter	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003689 all species →	Family	Zinc/iron permease	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16950 all species →	ZINC TRANSPORTER SLC39A7 HISTIDINE-RICH MEMBRANE PROTEIN KE4	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005385 all species →	Molecular Function	zinc ion transmembrane transporter activity	Interproscan
GO:0006882 all species →	Biological Process	intracellular zinc ion homeostasis	Interproscan
GO:0071577 all species →	Biological Process	zinc ion transmembrane transport	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0030001 all species →	Biological Process	metal ion transport	Interproscan
GO:0046873 all species →	Molecular Function	metal ion transmembrane transporter activity	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14713	SLC39A7, KE4, ZIP7; solute carrier family 39 (zinc transporter), member 7	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.