Detailed information of FUN_043385-T1 in Acropora pulchra

Genomic Location: ptg000047l:7794379...7810321
NR annotation: XP_029192561.2, laminin subunit alpha-3-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P55268Laminin subunit beta-2 OS=Homo sapiens OX=9606 GN=LAMB2 PE=1 SV=2
Q8K3K1Usherin OS=Rattus norvegicus OX=10116 GN=Ush2a PE=1 SV=2
Q90922Netrin-1 OS=Gallus gallus OX=9031 GN=NTN1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001807 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00052
all species →
Laminin_BLaminin B (Domain IV)DomainInterproscan
PF00053
all species →
Laminin_EGFLaminin EGF domainDomainInterproscan
PF21199
all species →
LAMININ_IV_BLaminin IV type B domainDomainInterproscan
PF00055
all species →
Laminin_NLaminin N-terminal (Domain VI)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002049
all species →
DomainLaminin-type EGF domainInterproscan
IPR000034
all species →
DomainLaminin IVInterproscan
IPR013015
all species →
DomainLaminin IV type BInterproscan
IPR050440
all species →
FamilyLaminin/Netrin Extracellular MatrixInterproscan
IPR008211
all species →
DomainLaminin, N-terminalInterproscan
IPR000742
all species →
DomainEGF-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10574
all species →
NETRIN/LAMININ-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005604
all species →
Cellular Componentbasement membraneInterproscan
GO:0008045
all species →
Biological Processmotor neuron axon guidanceInterproscan
GO:0009887
all species →
Biological Processanimal organ morphogenesisInterproscan
GO:0009888
all species →
Biological Processtissue developmentInterproscan
GO:0016358
all species →
Biological Processdendrite developmentInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K05636LAMB1; laminin, beta 1-Toxoplasmosisko05145deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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