Detailed information of FUN_043521-T1 in Acropora pulchra

Genomic Location: ptg000047l:9530313...9534675
NR annotation: XP_029180139.2, LOW QUALITY PROTEIN: actin-related protein 2/3 complex subunit 5-C-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q641B9Actin-related protein 2/3 complex subunit 5-C OS=Xenopus laevis OX=8355 GN=arpc5-c PE=2 SV=1
Q68FI4Actin-related protein 2/3 complex subunit 5-A OS=Xenopus laevis OX=8355 GN=arpc5-a PE=2 SV=1
Q6DE18Actin-related protein 2/3 complex subunit 5-B OS=Xenopus laevis OX=8355 GN=arpc5-b PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008727 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04699
all species →		P16-ArcARP2/3 complex 16 kDa subunit (p16-Arc)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006789
all species →		FamilyActin-related protein 2/3 complex subunit 5Interproscan
IPR036743
all species →		Homologous_superfamilyActin-related protein 2/3 complex subunit 5 superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12644
all species →		ARP2/3 COMPLEX 16 KD SUBUNIT P16-ARCInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005885
all species →		Cellular ComponentArp2/3 protein complexInterproscan
GO:0015629
all species →		Cellular Componentactin cytoskeletonInterproscan
GO:0034314
all species →		Biological ProcessArp2/3 complex-mediated actin nucleationInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0016477
all species →		Biological Processcell migrationInterproscan
GO:0051015
all species →		Molecular Functionactin filament bindingInterproscan
GO:0030833
all species →		Biological Processregulation of actin filament polymerizationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K05754ARPC5; actin related protein 2/3 complex, subunit 5-Cytoskeleton proteinsko04812deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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