Detailed information of FUN_043641-T1 in Acropora pulchra

Genomic Location: ptg000047l:11075428...11098835
NR annotation: XP_044180451.1, uncharacterized protein LOC114977334 isoform X1 [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003787 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00567
all species →		TUDORTudor domainDomainInterproscan
PF00076
all species →		RRM_1RNA recognition motifDomainInterproscan
PF12872
all species →		OST-HTHOST-HTH/LOTUS domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000504
all species →		DomainRNA recognition motif domainInterproscan
IPR050621
all species →		FamilyTudor domain-containingInterproscan
IPR035979
all species →		Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR035437
all species →		Homologous_superfamilySNase-like, OB-fold superfamilyInterproscan
IPR002999
all species →		DomainTudor domainInterproscan
IPR012677
all species →		Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR041966
all species →		Homologous_superfamilyLOTUS-like domainInterproscan
IPR025605
all species →		DomainOST-HTH/LOTUS domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22948
all species →		TUDOR DOMAIN CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0007283
all species →		Biological ProcessspermatogenesisInterproscan
GO:0030719
all species →		Biological ProcessP granule organizationInterproscan
GO:0034587
all species →		Biological ProcesspiRNA processingInterproscan
GO:0043186
all species →		Cellular ComponentP granuleInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_043641-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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