Detailed information of FUN_043965-T1 in Acropora pulchra

Genomic Location: ptg000067l:42794...43988
NR annotation: XP_015747524.1, PREDICTED: histone H2A [Acropora digitifera]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P35061Histone H2A OS=Acropora formosa OX=126732 PE=3 SV=2
P04735Late histone H2A.1 OS=Psammechinus miliaris OX=7660 PE=2 SV=2
Q6PV61Histone H2A OS=Penaeus vannamei OX=6689 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0118388 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16211
all species →		Histone_H2A_CC-terminus of histone H2AFamilyInterproscan
PF00125
all species →		HistoneCore histone H2A/H2B/H3/H4DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002119
all species →		FamilyHistone H2AInterproscan
IPR032454
all species →		DomainHistone H2A, C-terminal domainInterproscan
IPR007125
all species →		DomainHistone H2A/H2B/H3Interproscan
IPR009072
all species →		Homologous_superfamilyHistone-foldInterproscan
IPR032458
all species →		Conserved_siteHistone H2A conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23430
all species →		HISTONE H2AInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000786
all species →		Cellular ComponentnucleosomeInterproscan
GO:0000790
all species →		Cellular ComponentchromatinInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0006342
all species →		Biological Processheterochromatin formationInterproscan
GO:0030527
all species →		Molecular Functionstructural constituent of chromatinInterproscan
GO:0046982
all species →		Molecular Functionprotein heterodimerization activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11251H2A; histone H2A-Exosomeko04147deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP