Detailed information of FUN_044001-T1 in Siderastrea siderea

Genomic Location: contig_58:1250650...1258206
NR annotation: no NCBI-NR hit recorded
Species Siderastrea siderea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07189
all species →		SF3b10Splicing factor 3B subunit 10 (SF3b10)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009846
all species →		FamilySplicing factor 3B subunit 5/RDS3 complex subunit 10Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20978
all species →		SPLICING FACTOR 3B SUBUNIT 5Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000398
all species →		Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005686
all species →		Cellular ComponentU2 snRNPInterproscan
GO:0071011
all species →		Cellular Componentprecatalytic spliceosomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K12832SF3B5, SF3B10; splicing factor 3B subunit 5-Spliceosomeko03041deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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