Detailed information of FUN_044389-T1 in Acropora pulchra

Genomic Location: ntLink_6:6296473...6324890
NR annotation: XP_044172914.1, LOW QUALITY PROTEIN: Werner syndrome ATP-dependent helicase-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q14191Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN OS=Homo sapiens OX=9606 GN=WRN PE=1 SV=2
O93530Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN OS=Xenopus laevis OX=8355 GN=wrn PE=1 SV=1
O09053Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN OS=Mus musculus OX=10090 GN=Wrn PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000285 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00570
all species →
HRDCHRDC domainDomainInterproscan
PF14493
all species →
HTH_40Helix-turn-helix domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR044876
all species →
Homologous_superfamilyHRDC domain superfamilyInterproscan
IPR002121
all species →
DomainHRDC domainInterproscan
IPR010997
all species →
Homologous_superfamilyHRDC-like superfamilyInterproscan
IPR029491
all species →
DomainHelicase Helix-turn-helix domainInterproscan

 PANTHER
No PANTHER signature was detected for FUN_044389-T1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan
GO:0000166
all species →
Molecular Functionnucleotide bindingInterproscan
GO:0044237
all species →
Biological Processobsolete cellular metabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_044389-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP