Genomic Location: ptg000001l:1776912...1779656
NR annotation: XP_044170674.1, uncharacterized protein LOC122954719 [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families
| CDS |
| FUN_044548-T1 |
| Transcript |
| FUN_044548-T1 |
| Protein |
| FUN_044548-T1 |
| UniProt accession | Description |
|---|---|
| P14381 | Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1 |
| O00370 | LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1 |
| P08548 | LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000039 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00078 all species → | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF13966 all species → | zf-RVT | zinc-binding in reverse transcriptase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR052343 all species → | Family | Diverse Retrotransposon and Effector-Associated Protein | Interproscan |
| IPR000477 all species → | Domain | Reverse transcriptase domain | Interproscan |
| IPR043502 all species → | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR026960 all species → | Domain | Reverse transcriptase zinc-binding domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46890 all species → | NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED | Interproscan |
FUN_044548-T1. This gene does have a gene model — the search simply returned no hit.FUN_044548-T1.
