Detailed information of FUN_044621-T4 in Acropora pulchra

Genomic Location: ptg000002l:7506101...7539875
NR annotation: XP_044163714.1, LOW QUALITY PROTEIN: RNA helicase aquarius-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O60306RNA helicase aquarius OS=Homo sapiens OX=9606 GN=AQR PE=1 SV=4
Q8CFQ3RNA helicase aquarius OS=Mus musculus OX=10090 GN=Aqr PE=1 SV=2
E9QAM53'-5' exoribonuclease HELZ2 OS=Mus musculus OX=10090 GN=Helz2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003736 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21144
all species →
Aquarius_N_3rdIntron-binding protein aquarius insert domainDomainInterproscan
PF13086
all species →
AAA_11AAA domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045055
all species →
FamilyDNA2/NAM7-like helicaseInterproscan
IPR048967
all species →
DomainRNA helicase aquarius, insertion domainInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR041677
all species →
DomainDNA2/NAM7 helicase, helicase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10887
all species →
DNA2/NAM7 HELICASE FAMILYInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003729
all species →
Molecular FunctionmRNA bindingInterproscan
GO:0071013
all species →
Cellular Componentcatalytic step 2 spliceosomeInterproscan
GO:0004386
all species →
Molecular Functionhelicase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_044621-T4.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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