Detailed information of FUN_045498-T1 in Acropora pulchra

Genomic Location: ptg000025l:2110123...2113387
NR annotation: XP_029186635.2, heterochromatin protein 1-like isoform X1 [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9D5D8Chromodomain Y-like protein 2 OS=Mus musculus OX=10090 GN=Cdyl2 PE=1 SV=1
Q8N8U2Chromodomain Y-like protein 2 OS=Homo sapiens OX=9606 GN=CDYL2 PE=1 SV=2
P45973Chromobox protein homolog 5 OS=Homo sapiens OX=9606 GN=CBX5 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002073 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00385
all species →		ChromoChromo (CHRromatin Organisation MOdifier) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR023780
all species →		DomainChromo domainInterproscan
IPR016197
all species →		Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR051219
all species →		FamilyHeterochromatin-associated chromo domain-containing proteinInterproscan
IPR000953
all species →		DomainChromo/chromo shadow domainInterproscan
IPR023779
all species →		Conserved_siteChromo domain, conserved siteInterproscan
IPR017984
all species →		DomainChromo domain subgroupInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22812
all species →		CHROMOBOX PROTEINInterproscan

 Gene Ontology
No Gene Ontology signature was detected for FUN_045498-T1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_045498-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP