Genomic Location: ptg000027l:1683859...1688901
NR annotation: CAB3986322.1, Retrovirus-related Pol poly from transposon opus [Paramuricea clavata]
Species Acropora pulchra · all data for this species · gene families
| CDS |
| FUN_045604-T1 |
| Transcript |
| FUN_045604-T1 |
| Protein |
| FUN_045604-T1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000231 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00078 all species → | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF17919 all species → | RT_RNaseH_2 | RNase H-like domain found in reverse transcriptase | Domain | Interproscan |
| PF13650 all species → | Asp_protease_2 | Aspartyl protease | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000477 all species → | Domain | Reverse transcriptase domain | Interproscan |
| IPR021109 all species → | Homologous_superfamily | Aspartic peptidase domain superfamily | Interproscan |
| IPR041577 all species → | Domain | Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain | Interproscan |
| IPR051320 all species → | Family | Viral Replication and Maturation Polyprotein | Interproscan |
| IPR043128 all species → | Homologous_superfamily | Reverse transcriptase/Diguanylate cyclase domain | Interproscan |
| IPR043502 all species → | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR33064 all species → | POL PROTEIN | Interproscan |
FUN_045604-T1. This gene does have a gene model — the search simply returned no hit.FUN_045604-T1.
