Gene detail

Detailed information of FUN_046215-T1 in Siderastrea siderea

Genomic Location: contig_63:4897758...4903207
NR annotation: no NCBI-NR hit recorded
Species Siderastrea siderea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10442 all species →	FIST_C	FIST C domain	Domain	Interproscan
PF08495 all species →	FIST	FIST N domain	Domain	Interproscan
PF12937 all species →	F-box-like	F-box-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019494 all species →	Domain	FIST, C-domain	Interproscan
IPR036047 all species →	Homologous_superfamily	F-box-like domain superfamily	Interproscan
IPR013702 all species →	Domain	FIST domain, N-terminal	Interproscan
IPR001810 all species →	Domain	F-box domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14939 all species →	F-BOX ONLY PROTEIN 22	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000209 all species →	Biological Process	protein polyubiquitination	Interproscan
GO:0032436 all species →	Biological Process	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_046215-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.